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23 Commits

Author SHA1 Message Date
ZiWei
57f5c8752d 添加 BIOYOND_PolymerStation_TipBox 到瓶子和小提示盒分类 2026-04-27 17:09:20 +08:00
ZiWei
827169827a Remove outdated templates and validation guides for device and experiment graph skills.
- Deleted `templates.md` for workstation code templates.
- Removed `SKILL.md` and `reference.md` for editing experiment graphs.
- Deleted `SKILL.md` for validating device implementations.
2026-04-27 11:20:17 +08:00
ZiWei
c4a2f68649 Merge remote-tracking branch 'origin/dev' into feature/organic-extraction 2026-04-27 11:13:13 +08:00
ZiWei
d68fc5e380 Merge remote-tracking branch 'origin/dev' into feature/organic-extraction
# Conflicts:
#	.cursor/skills/add-workstation/SKILL.md
#	.cursor/skills/add-workstation/reference.md
2026-03-27 11:49:30 +08:00
ZiWei
f0ea32f163 Merge remote-tracking branch 'origin/dev' into feature/organic-extraction
# Conflicts:
#	.cursor/skills/add-device/SKILL.md
#	.cursor/skills/add-resource/SKILL.md
#	AGENTS.md
#	CLAUDE.md
2026-03-24 17:06:54 +08:00
ZiWei
3c8020813b feat: 添加设备验证指南,确保设备实现符合接口契约和编码标准 2026-03-17 09:54:12 +08:00
ZiWei
97996d316f Merge remote-tracking branch 'origin/dev' into feature/organic-extraction 2026-03-13 15:07:30 +08:00
ZiWei
9815961a1f feat: Add new developer guides for old devices and PLC framework integration 2026-03-11 14:10:11 +08:00
ZiWei
fe501c965f feat: Update workstation reference and templates with new PLC integration details and enhanced workflow mappings 2026-03-11 14:09:46 +08:00
ZiWei
92bfb069d5 feat: Implement Laiyu liquid handling station with enhanced device control, testing, and documentation. 2026-03-09 18:44:20 +08:00
ZiWei
b61c818f7f Merge remote-tracking branch 'origin/dev' into feature/organic-extraction 2026-03-09 09:39:17 +08:00
ZiWei
47a29a0c2f add:skill&agent 2026-03-06 16:54:31 +08:00
ZiWei
9c6f7c7505 Merge branch 'dev' into feature/organic-extraction 2026-03-02 15:32:36 +08:00
ZiWei
e4e4bfbe20 Merge branch 'dev' into feature/organic-extraction 2026-02-04 15:47:47 +08:00
ZiWei
64c748d921 Merge branch 'vibe/dev' into feature/organic-extraction 2026-02-03 10:39:44 +08:00
ZiWei
15ff0e9d30 feat: add Bioyond deck imports to resource registration 2026-02-03 10:28:51 +08:00
ZiWei
f8a52860ad Add BIOYOND deck imports and update JSON configurations with new UUIDs for various components 2026-02-03 10:25:47 +08:00
Xuwznln
e30c01d54e Dev backward (#228)
* Workbench example, adjust log level, and ci check (#220)

* TestLatency Return Value Example & gitignore update

* Adjust log level & Add workbench virtual example & Add not action decorator & Add check_mode &

* Add CI Check

* CI Check Fix 1

* CI Check Fix 2

* CI Check Fix 3

* CI Check Fix 4

* CI Check Fix 5

* Upgrade to py 3.11.14; ros 0.7; unilabos 0.10.16

* Update to ROS2 Humble 0.7

* Fix Build 1

* Fix Build 2

* Fix Build 3

* Fix Build 4

* Fix Build 5

* Fix Build 6

* Fix Build 7

* ci(deps): bump actions/configure-pages from 4 to 5 (#222)

Bumps [actions/configure-pages](https://github.com/actions/configure-pages) from 4 to 5.
- [Release notes](https://github.com/actions/configure-pages/releases)
- [Commits](https://github.com/actions/configure-pages/compare/v4...v5)

---
updated-dependencies:
- dependency-name: actions/configure-pages
  dependency-version: '5'
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* ci(deps): bump actions/upload-artifact from 4 to 6 (#224)

Bumps [actions/upload-artifact](https://github.com/actions/upload-artifact) from 4 to 6.
- [Release notes](https://github.com/actions/upload-artifact/releases)
- [Commits](https://github.com/actions/upload-artifact/compare/v4...v6)

---
updated-dependencies:
- dependency-name: actions/upload-artifact
  dependency-version: '6'
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* ci(deps): bump actions/upload-pages-artifact from 3 to 4 (#225)

Bumps [actions/upload-pages-artifact](https://github.com/actions/upload-pages-artifact) from 3 to 4.
- [Release notes](https://github.com/actions/upload-pages-artifact/releases)
- [Commits](https://github.com/actions/upload-pages-artifact/compare/v3...v4)

---
updated-dependencies:
- dependency-name: actions/upload-pages-artifact
  dependency-version: '4'
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* ci(deps): bump actions/checkout from 4 to 6 (#223)

Bumps [actions/checkout](https://github.com/actions/checkout) from 4 to 6.
- [Release notes](https://github.com/actions/checkout/releases)
- [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md)
- [Commits](https://github.com/actions/checkout/compare/v4...v6)

---
updated-dependencies:
- dependency-name: actions/checkout
  dependency-version: '6'
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* Fix Build 8

* Fix Build 9

* Fix Build 10

* Fix Build 11

* Fix Build 12

* Fix Build 13

* v0.10.17

(cherry picked from commit 176de521b4)

* CI Check use production mode

* Fix OT2 & ReAdd Virtual Devices

* add msg goal

* transfer liquid handles

* gather query

* add unilabos_class

* Support root node change pos

* save class name when deserialize & protocol execute test

* fix upload workflow json

* workflow upload & set liquid fix & add set liquid with plate

* speed up registry load

---------

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: hanhua@dp.tech <2509856570@qq.com>
2026-02-02 23:57:13 +08:00
ZiWei
37ec49f318 Refactor Bioyond resource handling: update warehouse mapping retrieval, add TipBox support, and improve liquid tracking logic. Migrate TipBox creation to bottle_carriers.py for better structure. 2026-01-29 16:31:14 +08:00
ZiWei
6bf57f18c1 Collaboration With Cursor 2026-01-29 11:29:38 +08:00
ZiWei
c4a3be1498 feat: enhance separation_step logic with polling thread management and error handling 2026-01-27 12:37:09 +08:00
ZiWei
e11070315d feat: add separation_step with sensor-motor linkage 2026-01-26 23:34:47 +08:00
ZiWei
50ebcad9d7 feat: add ZDT_X42 motor and XKC sensor drivers 2026-01-22 15:07:32 +08:00
39 changed files with 5846 additions and 882 deletions

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---
description: 设备驱动开发规范
globs: ["unilabos/devices/**/*.py"]
---
# 设备驱动开发规范
## 目录结构
```
unilabos/devices/
├── virtual/ # 虚拟设备(用于测试)
│ ├── virtual_stirrer.py
│ └── virtual_centrifuge.py
├── liquid_handling/ # 液体处理设备
├── balance/ # 天平设备
├── hplc/ # HPLC设备
├── pump_and_valve/ # 泵和阀门
├── temperature/ # 温度控制设备
├── workstation/ # 工作站(组合设备)
└── ...
```
## 设备类完整模板
```python
import asyncio
import logging
import time as time_module
from typing import Dict, Any, Optional
from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode
class MyDevice:
"""
设备类描述
Attributes:
device_id: 设备唯一标识
config: 设备配置字典
data: 设备状态数据
"""
_ros_node: BaseROS2DeviceNode
def __init__(
self,
device_id: str = None,
config: Dict[str, Any] = None,
**kwargs
):
"""
初始化设备
Args:
device_id: 设备ID
config: 配置字典
**kwargs: 其他参数
"""
# 兼容不同调用方式
if device_id is None and 'id' in kwargs:
device_id = kwargs.pop('id')
if config is None and 'config' in kwargs:
config = kwargs.pop('config')
self.device_id = device_id or "unknown_device"
self.config = config or {}
self.data = {}
# 从config读取参数
self.port = self.config.get('port') or kwargs.get('port', 'COM1')
self._max_value = self.config.get('max_value', 1000.0)
# 初始化日志
self.logger = logging.getLogger(f"MyDevice.{self.device_id}")
self.logger.info(f"设备 {self.device_id} 已创建")
def post_init(self, ros_node: BaseROS2DeviceNode):
"""
ROS节点注入 - 在ROS节点创建后调用
Args:
ros_node: ROS2设备节点实例
"""
self._ros_node = ros_node
async def initialize(self) -> bool:
"""
初始化设备 - 连接硬件、设置初始状态
Returns:
bool: 初始化是否成功
"""
self.logger.info(f"初始化设备 {self.device_id}")
try:
# 执行硬件初始化
# await self._connect_hardware()
# 设置初始状态
self.data.update({
"status": "待机",
"is_running": False,
"current_value": 0.0,
})
self.logger.info(f"设备 {self.device_id} 初始化完成")
return True
except Exception as e:
self.logger.error(f"初始化失败: {e}")
self.data["status"] = f"错误: {e}"
return False
async def cleanup(self) -> bool:
"""
清理设备 - 断开连接、释放资源
Returns:
bool: 清理是否成功
"""
self.logger.info(f"清理设备 {self.device_id}")
self.data.update({
"status": "离线",
"is_running": False,
})
return True
# ==================== 设备动作 ====================
async def execute_action(
self,
param1: float,
param2: str = "",
**kwargs
) -> bool:
"""
执行设备动作
Args:
param1: 参数1
param2: 参数2可选
Returns:
bool: 动作是否成功
"""
# 类型转换和验证
try:
param1 = float(param1)
except (ValueError, TypeError) as e:
self.logger.error(f"参数类型错误: {e}")
return False
# 参数验证
if param1 > self._max_value:
self.logger.error(f"参数超出范围: {param1} > {self._max_value}")
return False
self.logger.info(f"执行动作: param1={param1}, param2={param2}")
# 更新状态
self.data.update({
"status": "运行中",
"is_running": True,
})
# 执行动作(带进度反馈)
duration = 10.0 # 秒
start_time = time_module.time()
while True:
elapsed = time_module.time() - start_time
remaining = max(0, duration - elapsed)
progress = min(100, (elapsed / duration) * 100)
self.data.update({
"status": f"运行中: {progress:.0f}%",
"remaining_time": remaining,
})
if remaining <= 0:
break
await self._ros_node.sleep(1.0)
# 完成
self.data.update({
"status": "完成",
"is_running": False,
})
self.logger.info("动作执行完成")
return True
# ==================== 状态属性 ====================
@property
def status(self) -> str:
"""设备状态 - 自动发布为ROS Topic"""
return self.data.get("status", "未知")
@property
def is_running(self) -> bool:
"""是否正在运行"""
return self.data.get("is_running", False)
@property
def current_value(self) -> float:
"""当前值"""
return self.data.get("current_value", 0.0)
# ==================== 辅助方法 ====================
def get_device_info(self) -> Dict[str, Any]:
"""获取设备信息"""
return {
"device_id": self.device_id,
"status": self.status,
"is_running": self.is_running,
"current_value": self.current_value,
}
def __str__(self) -> str:
return f"MyDevice({self.device_id}: {self.status})"
```
## 关键规则
### 1. 参数处理
所有动作方法的参数都可能以字符串形式传入,必须进行类型转换:
```python
async def my_action(self, value: float, **kwargs) -> bool:
# 始终进行类型转换
try:
value = float(value)
except (ValueError, TypeError) as e:
self.logger.error(f"参数类型错误: {e}")
return False
```
### 2. vessel 参数处理
vessel 参数可能是字符串ID或字典
```python
def extract_vessel_id(vessel: Union[str, dict]) -> str:
if isinstance(vessel, dict):
return vessel.get("id", "")
return str(vessel) if vessel else ""
```
### 3. 状态更新
使用 `self.data` 字典存储状态,属性读取状态:
```python
# 更新状态
self.data["status"] = "运行中"
self.data["current_speed"] = 300.0
# 读取状态(通过属性)
@property
def status(self) -> str:
return self.data.get("status", "待机")
```
### 4. 异步等待
使用 ROS 节点的 sleep 方法:
```python
# 正确
await self._ros_node.sleep(1.0)
# 避免(除非在纯 Python 测试环境)
await asyncio.sleep(1.0)
```
### 5. 进度反馈
长时间运行的操作需要提供进度反馈:
```python
while remaining > 0:
progress = (elapsed / total_time) * 100
self.data["status"] = f"运行中: {progress:.0f}%"
self.data["remaining_time"] = remaining
await self._ros_node.sleep(1.0)
```
## 虚拟设备
虚拟设备用于测试和演示,放在 `unilabos/devices/virtual/` 目录:
- 类名以 `Virtual` 开头
- 文件名以 `virtual_` 开头
- 模拟真实设备的行为和时序
- 使用表情符号增强日志可读性(可选)
## 工作站设备
工作站是组合多个设备的复杂设备:
```python
from unilabos.devices.workstation.workstation_base import WorkstationBase
class MyWorkstation(WorkstationBase):
"""组合工作站"""
async def execute_workflow(self, workflow: Dict[str, Any]) -> bool:
"""执行工作流"""
pass
```
## 设备注册
设备类开发完成后,需要在注册表中注册:
1. 创建/编辑 `unilabos/registry/devices/my_category.yaml`
2. 添加设备配置(参考 `virtual_device.yaml`
3. 运行 `--complete_registry` 自动生成 schema

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---
description: 协议编译器开发规范
globs: ["unilabos/compile/**/*.py"]
---
# 协议编译器开发规范
## 概述
协议编译器负责将高级实验操作(如 Stir、Add、Filter编译为设备可执行的动作序列。
## 文件命名
- 位置: `unilabos/compile/`
- 命名: `{operation}_protocol.py`
- 示例: `stir_protocol.py`, `add_protocol.py`, `filter_protocol.py`
## 协议函数模板
```python
from typing import List, Dict, Any, Union
import networkx as nx
import logging
from .utils.unit_parser import parse_time_input
from .utils.vessel_parser import extract_vessel_id
logger = logging.getLogger(__name__)
def generate_{operation}_protocol(
G: nx.DiGraph,
vessel: Union[str, dict],
param1: Union[str, float] = "0",
param2: float = 0.0,
**kwargs
) -> List[Dict[str, Any]]:
"""
生成{操作}协议序列
Args:
G: 物理拓扑图 (NetworkX DiGraph)
vessel: 容器ID或Resource字典
param1: 参数1支持字符串单位如 "5 min"
param2: 参数2
**kwargs: 其他参数
Returns:
List[Dict]: 动作序列
Raises:
ValueError: 参数无效时
"""
# 1. 提取 vessel_id
vessel_id = extract_vessel_id(vessel)
# 2. 验证参数
if not vessel_id:
raise ValueError("vessel 参数不能为空")
if vessel_id not in G.nodes():
raise ValueError(f"容器 '{vessel_id}' 不存在于系统中")
# 3. 解析参数(支持单位)
parsed_param1 = parse_time_input(param1) # "5 min" -> 300.0
# 4. 查找设备
device_id = find_connected_device(G, vessel_id, device_type="my_device")
# 5. 生成动作序列
action_sequence = []
action = {
"device_id": device_id,
"action_name": "my_action",
"action_kwargs": {
"vessel": {"id": vessel_id}, # 始终使用字典格式
"param1": float(parsed_param1),
"param2": float(param2),
}
}
action_sequence.append(action)
logger.info(f"生成协议: {len(action_sequence)} 个动作")
return action_sequence
def find_connected_device(
G: nx.DiGraph,
vessel_id: str,
device_type: str = ""
) -> str:
"""
查找与容器相连的设备
Args:
G: 拓扑图
vessel_id: 容器ID
device_type: 设备类型关键字
Returns:
str: 设备ID
"""
# 查找所有匹配类型的设备
device_nodes = []
for node in G.nodes():
node_class = G.nodes[node].get('class', '') or ''
if device_type.lower() in node_class.lower():
device_nodes.append(node)
# 检查连接
if vessel_id and device_nodes:
for device in device_nodes:
if G.has_edge(device, vessel_id) or G.has_edge(vessel_id, device):
return device
# 返回第一个可用设备
if device_nodes:
return device_nodes[0]
# 默认设备
return f"{device_type}_1"
```
## 关键规则
### 1. vessel 参数处理
vessel 参数可能是字符串或字典,需要统一处理:
```python
def extract_vessel_id(vessel: Union[str, dict]) -> str:
"""提取vessel_id"""
if isinstance(vessel, dict):
# 可能是 {"id": "xxx"} 或完整 Resource 对象
return vessel.get("id", list(vessel.values())[0].get("id", ""))
return str(vessel) if vessel else ""
```
### 2. action_kwargs 中的 vessel
始终使用 `{"id": vessel_id}` 格式传递 vessel
```python
# 正确
"action_kwargs": {
"vessel": {"id": vessel_id}, # 字符串ID包装为字典
}
# 避免
"action_kwargs": {
"vessel": vessel_resource, # 不要传递完整 Resource 对象
}
```
### 3. 单位解析
使用 `parse_time_input` 解析时间参数:
```python
from .utils.unit_parser import parse_time_input
# 支持格式: "5 min", "1 h", "300", "1.5 hours"
time_seconds = parse_time_input("5 min") # -> 300.0
time_seconds = parse_time_input(120) # -> 120.0
time_seconds = parse_time_input("1 h") # -> 3600.0
```
### 4. 参数验证
所有参数必须进行验证和类型转换:
```python
# 验证范围
if speed < 10.0 or speed > 1500.0:
logger.warning(f"速度 {speed} 超出范围,修正为 300")
speed = 300.0
# 类型转换
param = float(param) if not isinstance(param, (int, float)) else param
```
### 5. 日志记录
使用项目日志记录器:
```python
logger = logging.getLogger(__name__)
def generate_protocol(...):
logger.info(f"开始生成协议...")
logger.debug(f"参数: vessel={vessel_id}, time={time}")
logger.warning(f"参数修正: {old_value} -> {new_value}")
```
## 便捷函数
为常用操作提供便捷函数:
```python
def stir_briefly(G: nx.DiGraph, vessel: Union[str, dict],
speed: float = 300.0) -> List[Dict[str, Any]]:
"""短时间搅拌30秒"""
return generate_stir_protocol(G, vessel, time="30", stir_speed=speed)
def stir_vigorously(G: nx.DiGraph, vessel: Union[str, dict],
time: str = "5 min") -> List[Dict[str, Any]]:
"""剧烈搅拌"""
return generate_stir_protocol(G, vessel, time=time, stir_speed=800.0)
```
## 测试函数
每个协议文件应包含测试函数:
```python
def test_{operation}_protocol():
"""测试协议生成"""
# 测试参数处理
vessel_dict = {"id": "flask_1", "name": "反应瓶1"}
vessel_id = extract_vessel_id(vessel_dict)
assert vessel_id == "flask_1"
# 测试单位解析
time_s = parse_time_input("5 min")
assert time_s == 300.0
if __name__ == "__main__":
test_{operation}_protocol()
```
## 现有协议参考
- `stir_protocol.py` - 搅拌操作
- `add_protocol.py` - 添加物料
- `filter_protocol.py` - 过滤操作
- `heatchill_protocol.py` - 加热/冷却
- `separate_protocol.py` - 分离操作
- `evaporate_protocol.py` - 蒸发操作

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---
description: 注册表配置规范 (YAML)
globs: ["unilabos/registry/**/*.yaml"]
---
# 注册表配置规范
## 概述
注册表使用 YAML 格式定义设备和资源类型,是 Uni-Lab-OS 的核心配置系统。
## 目录结构
```
unilabos/registry/
├── devices/ # 设备类型注册
│ ├── virtual_device.yaml
│ ├── liquid_handler.yaml
│ └── ...
├── device_comms/ # 通信设备配置
│ ├── communication_devices.yaml
│ └── modbus_ioboard.yaml
└── resources/ # 资源类型注册
├── bioyond/
├── organic/
├── opentrons/
└── ...
```
## 设备注册表格式
### 基本结构
```yaml
device_type_id:
# 基本信息
description: "设备描述"
version: "1.0.0"
category:
- category_name
icon: "icon_device.webp"
# 类配置
class:
module: "unilabos.devices.my_module:MyClass"
type: python
# 状态类型(属性 -> ROS消息类型
status_types:
status: String
temperature: Float64
is_running: Bool
# 动作映射
action_value_mappings:
action_name:
type: UniLabJsonCommand # 或 UniLabJsonCommandAsync
goal: {}
feedback: {}
result: {}
schema: {...}
handles: {}
```
### action_value_mappings 详细格式
```yaml
action_value_mappings:
# 同步动作
my_sync_action:
type: UniLabJsonCommand
goal:
param1: param1
param2: param2
feedback: {}
result:
success: success
message: message
goal_default:
param1: 0.0
param2: ""
handles: {}
placeholder_keys:
device_param: unilabos_devices # 设备选择器
resource_param: unilabos_resources # 资源选择器
schema:
title: "动作名称参数"
description: "动作描述"
type: object
properties:
goal:
type: object
properties:
param1:
type: number
param2:
type: string
required:
- param1
feedback: {}
result:
type: object
properties:
success:
type: boolean
message:
type: string
required:
- goal
# 异步动作
my_async_action:
type: UniLabJsonCommandAsync
goal: {}
feedback:
progress: progress
current_status: status
result:
success: success
schema: {...}
```
### 自动生成的动作
以 `auto-` 开头的动作由系统自动生成:
```yaml
action_value_mappings:
auto-initialize:
type: UniLabJsonCommandAsync
goal: {}
feedback: {}
result: {}
schema: {...}
auto-cleanup:
type: UniLabJsonCommandAsync
goal: {}
feedback: {}
result: {}
schema: {...}
```
### handles 配置
用于工作流编辑器中的数据流连接:
```yaml
handles:
input:
- handler_key: "input_resource"
data_type: "resource"
label: "输入资源"
data_source: "handle"
data_key: "resources"
output:
- handler_key: "output_labware"
data_type: "resource"
label: "输出器皿"
data_source: "executor"
data_key: "created_resource.@flatten"
```
## 资源注册表格式
```yaml
resource_type_id:
description: "资源描述"
version: "1.0.0"
category:
- category_name
icon: ""
handles: []
init_param_schema: {}
class:
module: "unilabos.resources.my_module:MyResource"
type: pylabrobot # 或 python
```
### PyLabRobot 资源示例
```yaml
BIOYOND_Electrolyte_6VialCarrier:
category:
- bottle_carriers
- bioyond
class:
module: "unilabos.resources.bioyond.bottle_carriers:BIOYOND_Electrolyte_6VialCarrier"
type: pylabrobot
version: "1.0.0"
```
## 状态类型映射
Python 类型到 ROS 消息类型的映射:
| Python 类型 | ROS 消息类型 |
|------------|-------------|
| `str` | `String` |
| `bool` | `Bool` |
| `int` | `Int64` |
| `float` | `Float64` |
| `list` | `String` (序列化) |
| `dict` | `String` (序列化) |
## 自动完善注册表
使用 `--complete_registry` 参数自动生成 schema
```bash
python -m unilabos.app.main --complete_registry
```
这会:
1. 扫描设备类的方法签名
2. 自动生成 `auto-` 前缀的动作
3. 生成 JSON Schema
4. 更新 YAML 文件
## 验证规则
1. **device_type_id** 必须唯一
2. **module** 路径必须正确可导入
3. **status_types** 的类型必须是有效的 ROS 消息类型
4. **schema** 必须是有效的 JSON Schema
## 示例:完整设备配置
```yaml
virtual_stirrer:
category:
- virtual_device
description: "虚拟搅拌器设备"
version: "1.0.0"
icon: "icon_stirrer.webp"
handles: []
init_param_schema: {}
class:
module: "unilabos.devices.virtual.virtual_stirrer:VirtualStirrer"
type: python
status_types:
status: String
operation_mode: String
current_speed: Float64
is_stirring: Bool
remaining_time: Float64
action_value_mappings:
auto-initialize:
type: UniLabJsonCommandAsync
goal: {}
feedback: {}
result: {}
schema:
title: "initialize参数"
type: object
properties:
goal:
type: object
properties: {}
feedback: {}
result: {}
required:
- goal
stir:
type: UniLabJsonCommandAsync
goal:
stir_time: stir_time
stir_speed: stir_speed
settling_time: settling_time
feedback:
current_speed: current_speed
remaining_time: remaining_time
result:
success: success
goal_default:
stir_time: 60.0
stir_speed: 300.0
settling_time: 30.0
handles: {}
schema:
title: "stir参数"
description: "搅拌操作"
type: object
properties:
goal:
type: object
properties:
stir_time:
type: number
description: "搅拌时间(秒)"
stir_speed:
type: number
description: "搅拌速度RPM"
settling_time:
type: number
description: "沉降时间(秒)"
required:
- stir_time
- stir_speed
feedback:
type: object
properties:
current_speed:
type: number
remaining_time:
type: number
result:
type: object
properties:
success:
type: boolean
required:
- goal
```

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@@ -0,0 +1,233 @@
---
description: ROS 2 集成开发规范
globs: ["unilabos/ros/**/*.py", "**/*_node.py"]
---
# ROS 2 集成开发规范
## 概述
Uni-Lab-OS 使用 ROS 2 作为设备通信中间件,基于 rclpy 实现。
## 核心组件
### BaseROS2DeviceNode
设备节点基类,提供:
- ROS Topic 自动发布(状态属性)
- Action Server 自动创建(设备动作)
- 资源管理服务
- 异步任务调度
```python
from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode
```
### 消息转换器
```python
from unilabos.ros.msgs.message_converter import (
convert_to_ros_msg,
convert_from_ros_msg_with_mapping,
msg_converter_manager,
ros_action_to_json_schema,
ros_message_to_json_schema,
)
```
## 设备与 ROS 集成
### post_init 方法
设备类必须实现 `post_init` 方法接收 ROS 节点:
```python
class MyDevice:
_ros_node: BaseROS2DeviceNode
def post_init(self, ros_node: BaseROS2DeviceNode):
"""ROS节点注入"""
self._ros_node = ros_node
```
### 状态属性发布
设备的 `@property` 属性会自动发布为 ROS Topic
```python
class MyDevice:
@property
def temperature(self) -> float:
return self._temperature
# 自动发布到 /{namespace}/temperature Topic
```
### Topic 配置装饰器
```python
from unilabos.utils.decorator import topic_config
class MyDevice:
@property
@topic_config(period=1.0, print_publish=False, qos=10)
def fast_data(self) -> float:
"""高频数据 - 每秒发布一次"""
return self._fast_data
@property
@topic_config(period=5.0)
def slow_data(self) -> str:
"""低频数据 - 每5秒发布一次"""
return self._slow_data
```
### 订阅装饰器
```python
from unilabos.utils.decorator import subscribe
class MyDevice:
@subscribe(topic="/external/sensor_data", qos=10)
def on_sensor_data(self, msg):
"""订阅外部Topic"""
self._sensor_value = msg.data
```
## 异步操作
### 使用 ROS 节点睡眠
```python
# 推荐使用ROS节点的睡眠方法
await self._ros_node.sleep(1.0)
# 不推荐直接使用asyncio可能导致回调阻塞
await asyncio.sleep(1.0)
```
### 获取事件循环
```python
from unilabos.ros.x.rclpyx import get_event_loop
loop = get_event_loop()
```
## 消息类型
### unilabos_msgs 包
```python
from unilabos_msgs.msg import Resource
from unilabos_msgs.srv import (
ResourceAdd,
ResourceDelete,
ResourceUpdate,
ResourceList,
SerialCommand,
)
from unilabos_msgs.action import SendCmd
```
### Resource 消息结构
```python
Resource:
id: str
name: str
category: str
type: str
parent: str
children: List[str]
config: str # JSON字符串
data: str # JSON字符串
sample_id: str
pose: Pose
```
## 日志适配器
```python
from unilabos.utils.log import info, debug, warning, error, trace
class MyDevice:
def __init__(self):
# 创建设备专属日志器
self.logger = logging.getLogger(f"MyDevice.{self.device_id}")
```
ROSLoggerAdapter 同时向自定义日志和 ROS 日志发送消息。
## Action Server
设备动作自动创建为 ROS Action Server
```yaml
# 在注册表中配置
action_value_mappings:
my_action:
type: UniLabJsonCommandAsync # 异步Action
goal: {...}
feedback: {...}
result: {...}
```
### Action 类型
- **UniLabJsonCommand**: 同步动作
- **UniLabJsonCommandAsync**: 异步动作支持feedback
## 服务客户端
```python
from rclpy.client import Client
# 调用其他节点的服务
response = await self._ros_node.call_service(
service_name="/other_node/service",
request=MyServiceRequest(...)
)
```
## 命名空间
设备节点使用命名空间隔离:
```
/{device_id}/ # 设备命名空间
/{device_id}/status # 状态Topic
/{device_id}/temperature # 温度Topic
/{device_id}/my_action # 动作Server
```
## 调试
### 查看 Topic
```bash
ros2 topic list
ros2 topic echo /{device_id}/status
```
### 查看 Action
```bash
ros2 action list
ros2 action info /{device_id}/my_action
```
### 查看 Service
```bash
ros2 service list
ros2 service call /{device_id}/resource_list unilabos_msgs/srv/ResourceList
```
## 最佳实践
1. **状态属性命名**: 使用蛇形命名法snake_case
2. **Topic 频率**: 根据数据变化频率调整,避免过高频率
3. **Action 反馈**: 长时间操作提供进度反馈
4. **错误处理**: 使用 try-except 捕获并记录错误
5. **资源清理**: 在 cleanup 方法中正确清理资源

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@@ -0,0 +1,357 @@
---
description: 测试开发规范
globs: ["tests/**/*.py", "**/test_*.py"]
---
# 测试开发规范
## 目录结构
```
tests/
├── __init__.py
├── devices/ # 设备测试
│ └── liquid_handling/
│ └── test_transfer_liquid.py
├── resources/ # 资源测试
│ ├── test_bottle_carrier.py
│ └── test_resourcetreeset.py
├── ros/ # ROS消息测试
│ └── msgs/
│ ├── test_basic.py
│ ├── test_conversion.py
│ └── test_mapping.py
└── workflow/ # 工作流测试
└── merge_workflow.py
```
## 测试框架
使用 pytest 作为测试框架:
```bash
# 运行所有测试
pytest tests/
# 运行特定测试文件
pytest tests/resources/test_bottle_carrier.py
# 运行特定测试函数
pytest tests/resources/test_bottle_carrier.py::test_bottle_carrier
# 显示详细输出
pytest -v tests/
# 显示打印输出
pytest -s tests/
```
## 测试文件模板
```python
import pytest
from typing import List, Dict, Any
# 导入被测试的模块
from unilabos.resources.bioyond.bottle_carriers import (
BIOYOND_Electrolyte_6VialCarrier,
)
from unilabos.resources.bioyond.bottles import (
BIOYOND_PolymerStation_Solid_Vial,
)
class TestBottleCarrier:
"""BottleCarrier 测试类"""
def setup_method(self):
"""每个测试方法前执行"""
self.carrier = BIOYOND_Electrolyte_6VialCarrier("test_carrier")
def teardown_method(self):
"""每个测试方法后执行"""
pass
def test_carrier_creation(self):
"""测试载架创建"""
assert self.carrier.name == "test_carrier"
assert len(self.carrier.sites) == 6
def test_bottle_placement(self):
"""测试瓶子放置"""
bottle = BIOYOND_PolymerStation_Solid_Vial("test_bottle")
# 测试逻辑...
assert bottle.name == "test_bottle"
def test_standalone_function():
"""独立测试函数"""
result = some_function()
assert result is True
# 参数化测试
@pytest.mark.parametrize("input,expected", [
("5 min", 300.0),
("1 h", 3600.0),
("120", 120.0),
(60, 60.0),
])
def test_time_parsing(input, expected):
"""测试时间解析"""
from unilabos.compile.utils.unit_parser import parse_time_input
assert parse_time_input(input) == expected
# 异常测试
def test_invalid_input_raises_error():
"""测试无效输入抛出异常"""
with pytest.raises(ValueError) as exc_info:
invalid_function("bad_input")
assert "invalid" in str(exc_info.value).lower()
# 跳过条件测试
@pytest.mark.skipif(
not os.environ.get("ROS_DISTRO"),
reason="需要ROS环境"
)
def test_ros_feature():
"""需要ROS环境的测试"""
pass
```
## 设备测试
### 虚拟设备测试
```python
import pytest
import asyncio
from unittest.mock import MagicMock, AsyncMock
from unilabos.devices.virtual.virtual_stirrer import VirtualStirrer
class TestVirtualStirrer:
"""VirtualStirrer 测试"""
@pytest.fixture
def stirrer(self):
"""创建测试用搅拌器"""
device = VirtualStirrer(
device_id="test_stirrer",
config={"max_speed": 1500.0, "min_speed": 50.0}
)
# Mock ROS节点
mock_node = MagicMock()
mock_node.sleep = AsyncMock(return_value=None)
device.post_init(mock_node)
return device
@pytest.mark.asyncio
async def test_initialize(self, stirrer):
"""测试初始化"""
result = await stirrer.initialize()
assert result is True
assert stirrer.status == "待机中"
@pytest.mark.asyncio
async def test_stir_action(self, stirrer):
"""测试搅拌动作"""
await stirrer.initialize()
result = await stirrer.stir(
stir_time=5.0,
stir_speed=300.0,
settling_time=2.0
)
assert result is True
assert stirrer.operation_mode == "Completed"
@pytest.mark.asyncio
async def test_stir_invalid_speed(self, stirrer):
"""测试无效速度"""
await stirrer.initialize()
# 速度超出范围
result = await stirrer.stir(
stir_time=5.0,
stir_speed=2000.0, # 超过max_speed
settling_time=0.0
)
assert result is False
assert "错误" in stirrer.status
```
### 异步测试配置
```python
# conftest.py
import pytest
import asyncio
@pytest.fixture(scope="session")
def event_loop():
"""创建事件循环"""
loop = asyncio.get_event_loop_policy().new_event_loop()
yield loop
loop.close()
```
## 资源测试
```python
import pytest
from unilabos.resources.resource_tracker import (
ResourceTreeSet,
ResourceTreeInstance,
)
def test_resource_tree_creation():
"""测试资源树创建"""
tree_set = ResourceTreeSet()
# 添加资源
resource = {"id": "res_1", "name": "Resource 1"}
tree_set.add_resource(resource)
# 验证
assert len(tree_set.all_nodes) == 1
assert tree_set.get_resource("res_1") is not None
def test_resource_tree_merge():
"""测试资源树合并"""
local_set = ResourceTreeSet()
remote_set = ResourceTreeSet()
# 设置数据...
local_set.merge_remote_resources(remote_set)
# 验证合并结果...
```
## ROS 消息测试
```python
import pytest
from unilabos.ros.msgs.message_converter import (
convert_to_ros_msg,
convert_from_ros_msg_with_mapping,
msg_converter_manager,
)
def test_message_conversion():
"""测试消息转换"""
# Python -> ROS
python_data = {"id": "test", "value": 42}
ros_msg = convert_to_ros_msg(python_data, MyMsgType)
assert ros_msg.id == "test"
assert ros_msg.value == 42
# ROS -> Python
result = convert_from_ros_msg_with_mapping(ros_msg, mapping)
assert result["id"] == "test"
```
## 协议测试
```python
import pytest
import networkx as nx
from unilabos.compile.stir_protocol import (
generate_stir_protocol,
extract_vessel_id,
)
@pytest.fixture
def topology_graph():
"""创建测试拓扑图"""
G = nx.DiGraph()
G.add_node("flask_1", **{"class": "flask"})
G.add_node("stirrer_1", **{"class": "virtual_stirrer"})
G.add_edge("stirrer_1", "flask_1")
return G
def test_generate_stir_protocol(topology_graph):
"""测试搅拌协议生成"""
actions = generate_stir_protocol(
G=topology_graph,
vessel="flask_1",
time="5 min",
stir_speed=300.0
)
assert len(actions) == 1
assert actions[0]["device_id"] == "stirrer_1"
assert actions[0]["action_name"] == "stir"
def test_extract_vessel_id():
"""测试vessel_id提取"""
# 字典格式
assert extract_vessel_id({"id": "flask_1"}) == "flask_1"
# 字符串格式
assert extract_vessel_id("flask_2") == "flask_2"
# 空值
assert extract_vessel_id("") == ""
```
## 测试标记
```python
# 慢速测试
@pytest.mark.slow
def test_long_running():
pass
# 需要网络
@pytest.mark.network
def test_network_call():
pass
# 需要ROS
@pytest.mark.ros
def test_ros_feature():
pass
```
运行特定标记的测试:
```bash
pytest -m "not slow" # 排除慢速测试
pytest -m ros # 仅ROS测试
```
## 覆盖率
```bash
# 生成覆盖率报告
pytest --cov=unilabos tests/
# HTML报告
pytest --cov=unilabos --cov-report=html tests/
```
## 最佳实践
1. **测试命名**: `test_{功能}_{场景}_{预期结果}`
2. **独立性**: 每个测试独立运行,不依赖其他测试
3. **Mock外部依赖**: 使用 unittest.mock 模拟外部服务
4. **参数化**: 使用 `@pytest.mark.parametrize` 减少重复代码
5. **fixtures**: 使用 fixtures 共享测试设置
6. **断言清晰**: 每个断言只验证一件事

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---
description: Uni-Lab-OS 实验室自动化平台开发规范 - 核心规则
globs: ["**/*.py", "**/*.yaml", "**/*.json"]
---
# Uni-Lab-OS 项目开发规范
## 项目概述
Uni-Lab-OS 是一个实验室自动化操作系统,用于连接和控制各种实验设备,实现实验工作流的自动化和标准化。
## 技术栈
- **Python 3.11** - 核心开发语言
- **ROS 2** - 设备通信中间件 (rclpy)
- **Conda/Mamba** - 包管理 (robostack-staging, conda-forge)
- **FastAPI** - Web API 服务
- **WebSocket** - 实时通信
- **NetworkX** - 拓扑图管理
- **YAML** - 配置和注册表定义
- **PyLabRobot** - 实验室自动化库集成
- **pytest** - 测试框架
- **asyncio** - 异步编程
## 项目结构
```
unilabos/
├── app/ # 应用入口、Web服务、后端
├── compile/ # 协议编译器 (stir, add, filter 等)
├── config/ # 配置管理
├── devices/ # 设备驱动 (真实/虚拟)
├── device_comms/ # 设备通信协议
├── device_mesh/ # 3D网格和可视化
├── registry/ # 设备和资源类型注册表 (YAML)
├── resources/ # 资源定义
├── ros/ # ROS 2 集成
├── utils/ # 工具函数
└── workflow/ # 工作流管理
```
## 代码规范
### Python 风格
1. **类型注解**:所有函数必须使用类型注解
```python
def transfer_liquid(
source: str,
destination: str,
volume: float,
**kwargs
) -> List[Dict[str, Any]]:
```
2. **Docstring**:使用 Google 风格的文档字符串
```python
def initialize(self) -> bool:
"""
初始化设备
Returns:
bool: 初始化是否成功
"""
```
3. **导入顺序**
- 标准库
- 第三方库
- ROS 相关 (rclpy, unilabos_msgs)
- 项目内部模块
### 异步编程
1. 设备操作方法使用 `async def`
2. 使用 `await self._ros_node.sleep()` 而非 `asyncio.sleep()`
3. 长时间运行操作需提供进度反馈
```python
async def stir(self, stir_time: float, stir_speed: float, **kwargs) -> bool:
"""执行搅拌操作"""
start_time = time_module.time()
while True:
elapsed = time_module.time() - start_time
remaining = max(0, stir_time - elapsed)
self.data.update({
"remaining_time": remaining,
"status": f"搅拌中: {stir_speed} RPM"
})
if remaining <= 0:
break
await self._ros_node.sleep(1.0)
return True
```
### 日志规范
使用项目自定义日志系统:
```python
from unilabos.utils.log import logger, info, debug, warning, error, trace
# 在设备类中使用
self.logger = logging.getLogger(f"DeviceName.{self.device_id}")
self.logger.info("设备初始化完成")
```
## 设备驱动开发
### 设备类结构
```python
from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode
class MyDevice:
"""设备驱动类"""
_ros_node: BaseROS2DeviceNode
def __init__(self, device_id: str = None, config: Dict[str, Any] = None, **kwargs):
self.device_id = device_id or "unknown_device"
self.config = config or {}
self.data = {} # 设备状态数据
def post_init(self, ros_node: BaseROS2DeviceNode):
"""ROS节点注入"""
self._ros_node = ros_node
async def initialize(self) -> bool:
"""初始化设备"""
pass
async def cleanup(self) -> bool:
"""清理设备"""
pass
# 状态属性 - 自动发布为 ROS Topic
@property
def status(self) -> str:
return self.data.get("status", "待机")
```
### 状态属性装饰器
```python
from unilabos.utils.decorator import topic_config
class MyDevice:
@property
@topic_config(period=1.0, qos=10) # 每秒发布一次
def temperature(self) -> float:
return self._temperature
```
### 虚拟设备
虚拟设备放置在 `unilabos/devices/virtual/` 目录下,命名为 `virtual_*.py`
## 注册表配置
### 设备注册表 (YAML)
位置: `unilabos/registry/devices/*.yaml`
```yaml
my_device_type:
category:
- my_category
description: "设备描述"
version: "1.0.0"
class:
module: "unilabos.devices.my_device:MyDevice"
type: python
status_types:
status: String
temperature: Float64
action_value_mappings:
auto-initialize:
type: UniLabJsonCommandAsync
goal: {}
feedback: {}
result: {}
schema: {...}
```
### 资源注册表 (YAML)
位置: `unilabos/registry/resources/**/*.yaml`
```yaml
my_container:
category:
- container
class:
module: "unilabos.resources.my_resource:MyContainer"
type: pylabrobot
version: "1.0.0"
```
## 协议编译器
位置: `unilabos/compile/*_protocol.py`
### 协议生成函数模板
```python
from typing import List, Dict, Any, Union
import networkx as nx
def generate_my_protocol(
G: nx.DiGraph,
vessel: Union[str, dict],
param1: float = 0.0,
**kwargs
) -> List[Dict[str, Any]]:
"""
生成操作协议序列
Args:
G: 物理拓扑图
vessel: 容器ID或字典
param1: 参数1
Returns:
List[Dict]: 动作序列
"""
# 提取vessel_id
vessel_id = vessel if isinstance(vessel, str) else vessel.get("id", "")
# 查找设备
device_id = find_connected_device(G, vessel_id)
# 生成动作
action_sequence = [{
"device_id": device_id,
"action_name": "my_action",
"action_kwargs": {
"vessel": {"id": vessel_id},
"param1": float(param1)
}
}]
return action_sequence
```
## 测试规范
### 测试文件位置
- 单元测试: `tests/` 目录
- 设备测试: `tests/devices/`
- 资源测试: `tests/resources/`
- ROS消息测试: `tests/ros/msgs/`
### 测试命名
```python
# tests/devices/my_device/test_my_device.py
import pytest
def test_device_initialization():
"""测试设备初始化"""
pass
def test_device_action():
"""测试设备动作"""
pass
```
## 错误处理
```python
from unilabos.utils.exception import UniLabException
try:
result = await device.execute_action()
except ValueError as e:
self.logger.error(f"参数错误: {e}")
self.data["status"] = "错误: 参数无效"
return False
except Exception as e:
self.logger.error(f"执行失败: {e}")
raise
```
## 配置管理
```python
from unilabos.config.config import BasicConfig, HTTPConfig
# 读取配置
port = BasicConfig.port
is_host = BasicConfig.is_host_mode
# 配置文件: local_config.py
```
## 常用工具
### 单例模式
```python
from unilabos.utils.decorator import singleton
@singleton
class MyManager:
pass
```
### 类型检查
```python
from unilabos.utils.type_check import NoAliasDumper
yaml.dump(data, f, Dumper=NoAliasDumper)
```
### 导入管理
```python
from unilabos.utils.import_manager import get_class
device_class = get_class("unilabos.devices.my_device:MyDevice")
```
## Git 提交规范
提交信息格式:
```
<type>(<scope>): <subject>
<body>
```
类型:
- `feat`: 新功能
- `fix`: 修复bug
- `docs`: 文档更新
- `refactor`: 重构
- `test`: 测试相关
- `chore`: 构建/工具相关
示例:
```
feat(devices): 添加虚拟搅拌器设备
- 实现VirtualStirrer类
- 支持定时搅拌和持续搅拌模式
- 添加速度验证逻辑
```

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# ============================================================
# Uni-Lab-OS Cursor Ignore 配置,控制 Cursor AI 的文件索引范围
# ============================================================
# ==================== 敏感配置文件 ====================
# 本地配置(可能包含密钥)
**/local_config.py
test_config.py
local_test*.py
# 环境变量和密钥
.env
.env.*
**/.certs/
*.pem
*.key
credentials.json
secrets.yaml
# ==================== 二进制和 3D 模型文件 ====================
# 3D 模型文件(无需索引)
*.stl
*.dae
*.glb
*.gltf
*.obj
*.fbx
*.blend
# URDF/Xacro 机器人描述文件大型XML
*.xacro
# 图片文件
*.png
*.jpg
*.jpeg
*.gif
*.webp
*.ico
*.svg
*.bmp
# 压缩包
*.zip
*.tar
*.tar.gz
*.tgz
*.bz2
*.rar
*.7z
# ==================== Python 生成文件 ====================
__pycache__/
*.py[cod]
*$py.class
*.so
*.pyd
*.egg
*.egg-info/
.eggs/
dist/
build/
*.manifest
*.spec
# ==================== IDE 和编辑器 ====================
.idea/
.vscode/
*.swp
*.swo
*~
.#*
# ==================== 测试和覆盖率 ====================
.pytest_cache/
.coverage
.coverage.*
htmlcov/
.tox/
.nox/
coverage.xml
*.cover
# ==================== 虚拟环境 ====================
.venv/
venv/
env/
ENV/
# ==================== ROS 2 生成文件 ====================
# ROS 构建目录
build/
install/
log/
logs/
devel/
# ROS 消息生成
msg_gen/
srv_gen/
msg/*Action.msg
msg/*ActionFeedback.msg
msg/*ActionGoal.msg
msg/*ActionResult.msg
msg/*Feedback.msg
msg/*Goal.msg
msg/*Result.msg
msg/_*.py
srv/_*.py
build_isolated/
devel_isolated/
# ROS 动态配置
*.cfgc
/cfg/cpp/
/cfg/*.py
# ==================== 项目特定目录 ====================
# 工作数据目录
unilabos_data/
# 临时和输出目录
temp/
output/
cursor_docs/
configs/
# 文档构建
docs/_build/
/site
# ==================== 大型数据文件 ====================
# 点云数据
*.pcd
# GraphML 图形文件
*.graphml
# 日志文件
*.log
# 数据库
*.sqlite3
*.db
# Jupyter 检查点
.ipynb_checkpoints/
# ==================== 设备网格资源 ====================
# 3D 网格文件目录(包含大量 STL/DAE 文件)
unilabos/device_mesh/devices/**/*.stl
unilabos/device_mesh/devices/**/*.dae
unilabos/device_mesh/resources/**/*.stl
unilabos/device_mesh/resources/**/*.glb
unilabos/device_mesh/resources/**/*.xacro
# RViz 配置
*.rviz
# ==================== 系统文件 ====================
.DS_Store
Thumbs.db
desktop.ini
# ==================== 锁文件 ====================
poetry.lock
Pipfile.lock
pdm.lock
package-lock.json
yarn.lock
# ==================== 类型检查缓存 ====================
.mypy_cache/
.dmypy.json
.pytype/
.pyre/
pyrightconfig.json
# ==================== 其他 ====================
# Catkin
CATKIN_IGNORE
# Eclipse/Qt
.project
.cproject
CMakeLists.txt.user
*.user
qtcreator-*

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## 设备接入
当被要求添加设备驱动时,参考 `docs/ai_guides/add_device.md`
该指南包含完整的模板和已有设备接口参考。
## 关键规则
- 动作方法的参数名是接口契约,不可重命名
- `status` 字符串必须与同类已有设备一致
- `self.data` 必须在 `__init__` 中预填充所有属性字段
- 异步方法中使用 `await self._ros_node.sleep()`,禁止 `time.sleep()`

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@@ -25,7 +25,7 @@ jobs:
fetch-depth: 0
- name: Setup Miniforge
uses: conda-incubator/setup-miniconda@v4
uses: conda-incubator/setup-miniconda@v3
with:
miniforge-version: latest
use-mamba: true

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@@ -70,7 +70,7 @@ jobs:
- name: Setup Miniforge (with mamba)
if: steps.should_build.outputs.should_build == 'true'
uses: conda-incubator/setup-miniconda@v4
uses: conda-incubator/setup-miniconda@v3
with:
miniforge-version: latest
use-mamba: true

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@@ -51,7 +51,7 @@ jobs:
fetch-depth: 0
- name: Setup Miniforge (with mamba)
uses: conda-incubator/setup-miniconda@v4
uses: conda-incubator/setup-miniconda@v3
with:
miniforge-version: latest
use-mamba: true

View File

@@ -98,7 +98,7 @@ jobs:
- name: Setup Miniconda
if: steps.should_build.outputs.should_build == 'true'
uses: conda-incubator/setup-miniconda@v4
uses: conda-incubator/setup-miniconda@v3
with:
miniconda-version: 'latest'
channels: conda-forge,robostack-staging,defaults

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@@ -98,7 +98,7 @@ jobs:
- name: Setup Miniconda
if: steps.should_build.outputs.should_build == 'true'
uses: conda-incubator/setup-miniconda@v4
uses: conda-incubator/setup-miniconda@v3
with:
miniconda-version: 'latest'
channels: conda-forge,robostack-staging,uni-lab,defaults

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# Uni-Lab-OS 设备接入 Agent — 提示词模板
> 本文件提供一套可直接复制使用的 Agent 系统提示词,以及各平台的配置说明。
> 提示词模板与 `add_device.md`(领域知识)配合使用,前者控制 Agent 行为,后者提供完整的技术细节。
---
## 系统提示词模板
以下内容可直接作为系统提示词 / Instructions / Custom Instructions 使用。`{{...}}` 标记的变量根据平台替换。
---
### 开始复制 ↓
```
你是 Uni-Lab-OS 设备接入专家。你的任务是帮助用户将新的实验室硬件设备接入 Uni-Lab-OS 系统。
你能做的事:
- 根据用户描述生成完整的设备驱动代码Python、注册表YAML和实验图文件JSON
- 解读用户提供的通信协议文档、SDK 代码、或口述的指令格式
- 诊断已有驱动代码的接口对齐问题
你不能做的事:
- 凭空猜测硬件私有通信指令(必须从用户提供的资料中获取)
- 替代真实硬件联调测试
## 知识来源
{{KNOWLEDGE_LOADING}}
## 工作流程
当用户要求接入新设备时,严格按以下流程执行。每个暂停点必须等待用户确认后再继续。
### 阶段 1设备画像交互
向用户收集以下三个信息,可以一次性提问:
1. **设备类别** — 属于以下哪一种?
- temperature温控、pump_and_valve泵阀、motor电机
- heaterstirrer加热搅拌、balance天平、sensor传感器
- liquid_handling液体处理、robot_arm机械臂、workstation工作站
- virtual虚拟设备、custom自定义
- 如果是 pump_and_valve进一步确认子类型注射泵 / 电磁阀 / 蠕动泵
2. **设备英文名称** — 用于文件名和类名(如 my_heater、runze_sy03b
3. **通信协议** — Serial(RS232/RS485) / Modbus RTU / Modbus TCP / TCP Socket / HTTP API / OPC UA / 无通信(虚拟)
⏸️ **暂停:等待用户回答后继续**
### 阶段 2指令协议收集交互
根据上一步确定的通信协议,引导用户提供指令信息:
- 如果用户有 **SDK/驱动代码**:请用户提供代码文件,你从中提取通信逻辑
- 如果用户有 **协议文档**请用户提供文档PDF/图片/文本),你从中解析指令格式
- 如果用户 **口头描述**:针对每个标准动作逐一确认硬件指令
- 如果是 **标准协议**Modbus 寄存器表、SCPI请用户提供寄存器/指令映射
- 如果是 **虚拟设备**:跳过此阶段
⏸️ **暂停:确认已获取足够的指令协议信息**
### 阶段 3确认摘要
在开始生成代码前,向用户展示你的理解摘要:
```
设备接入摘要:
- 设备名称:<name>
- 设备类别:<category><subtype>
- 通信协议:<protocol>
- 指令来源:<source>
- 将要实现的属性:<list>
- 将要实现的动作:<list>
- 同类已有设备:<existing>(将对齐其接口)
```
⏸️ **暂停:用户确认"没问题"后再生成代码**
### 阶段 4自动生成无需暂停
按以下顺序自动执行:
1. **对齐同类设备接口**(指南第四步)
- 查阅指南中的「现有设备接口快照」或搜索仓库注册表
- 确保所有已有设备的 status_types 和动作方法都被覆盖
- 参数名必须完全一致
2. **生成驱动代码** — `unilabos/devices/<category>/<name>.py`
3. **生成注册表** — `unilabos/registry/devices/<name>.yaml`(最小配置)
4. **生成图文件** — `unilabos/test/experiments/graph_example_<name>.json`
### 阶段 5验证输出
生成完成后,逐项检查对齐验证清单并展示结果:
```
对齐验证清单:
- [x] 所有动作方法的参数名与已有设备完全一致
- [x] status 属性返回的字符串值与已有设备一致
- [x] 已有设备的所有 status_types 字段都有对应 @property
- [x] 已有设备的所有非 auto- 前缀的 action 都有对应方法
- [x] self.data 在 __init__ 中已预填充所有属性字段的默认值
- [x] 串口/二进制协议的响应解析先定位帧起始标记
```
如果有未通过的项,主动修复后再展示。
## 硬约束(违反任何一条都会导致设备接入失败)
1. **禁止重命名参数** — 动作方法的参数名(如 volume、position、max_velocity是接口契约框架通过参数名分派调用。绝不能加后缀如 volume_ml、改名如 speed_ml_s。单位写在 docstring 中。
2. **status 字符串必须一致** — 如果同类已有设备用英文(如 "Idle" / "Busy"),新驱动必须用相同的字符串,不能改为中文(如 "就绪")。
3. **self.data 必须预填充** — 不能用空字典 {}。框架在 initialize() 之前就可能读取属性值。每个 @property 对应的键都必须在 __init__ 中有初始值。
4. **禁止跳过接口对齐** — 对齐同类设备接口是强制步骤。缺失的属性和动作会导致设备在工作流中不可互换。
5. **串口解析先找帧头** — RS-485 总线上响应前常有回声/噪声字节。必须先定位帧起始标记(如 /、0xFE禁止用硬编码索引直接解析。
6. **异步等待用 _ros_node.sleep** — 在 async 方法中使用 await self._ros_node.sleep(),禁止 time.sleep()(阻塞事件循环)和 asyncio.sleep()。
7. **物理单位对外暴露** — 对外参数使用用户友好的物理单位mL、°C、RPM驱动内部负责转换到硬件原始值步数、Hz、寄存器值
## 代码骨架参考
所有设备驱动遵循以下结构:
```python
import logging
import time as time_module
from typing import Dict, Any
try:
from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode
except ImportError:
BaseROS2DeviceNode = None
class MyDevice:
_ros_node: "BaseROS2DeviceNode"
def __init__(self, device_id: str = None, config: Dict[str, Any] = None, **kwargs):
if device_id is None and 'id' in kwargs:
device_id = kwargs.pop('id')
if config is None and 'config' in kwargs:
config = kwargs.pop('config')
self.device_id = device_id or "unknown_device"
self.config = config or {}
self.logger = logging.getLogger(f"MyDevice.{self.device_id}")
self.data = {
"status": "Idle",
# 所有 @property 的键都必须在此预填充
}
def post_init(self, ros_node: "BaseROS2DeviceNode"):
self._ros_node = ros_node
async def initialize(self) -> bool:
self.data["status"] = "Idle"
return True
async def cleanup(self) -> bool:
self.data["status"] = "Offline"
return True
@property
def status(self) -> str:
return self.data.get("status", "Idle")
```
## 注册表最小配置
```yaml
my_device:
class:
module: unilabos.devices.<category>.<file>:MyDevice
type: python
```
启动时 --complete_registry 自动生成 status_types 和 action_value_mappings。
## 图文件模板
```json
{
"nodes": [
{
"id": "my_device_1",
"name": "设备名称",
"children": [],
"parent": null,
"type": "device",
"class": "my_device",
"position": {"x": 0, "y": 0, "z": 0},
"config": {},
"data": {}
}
]
}
```
## 现有设备接口快照(对齐用)
对齐时参考以下已有设备接口。如果能联网,优先从 GitHub 获取最新版本:
https://github.com/dptech-corp/Uni-Lab-OS/tree/main/unilabos/registry/devices/
### pump_and_valve — 注射泵
已有设备syringe_pump_with_valve.runze.SY03B-T06
属性status(str, "Idle"/"Busy"), valve_position(str), position(float, mL), max_velocity(float, mL/s), mode(int), plunger_position(String), velocity_grade(String), velocity_init(String), velocity_end(String)
方法签名(参数名不可改):
- initialize()
- set_valve_position(position)
- set_position(position: float, max_velocity: float = None)
- pull_plunger(volume: float)
- push_plunger(volume: float)
- set_max_velocity(velocity: float)
- set_velocity_grade(velocity)
- stop_operation()
### pump_and_valve — 电磁阀
属性status(str), valve_position(str)
方法open(), close(), set_valve_position(position), is_open(), is_closed()
### temperature
属性status(str), temp(float, °C), temp_target(float, °C), stir_speed(float, RPM), temp_warning(float, °C)
### motor
属性status(str), position(int)
### sensor
属性level(bool), rssi(int)
```
### 结束复制 ↑
---
## `{{KNOWLEDGE_LOADING}}` 变量替换
根据平台能力,将提示词中的 `{{KNOWLEDGE_LOADING}}` 替换为以下对应内容:
### 方案 A有知识库Custom GPT / Claude Project
```
你的知识库中包含 add_device.md 文件,这是完整的设备接入指南。
执行工作流时,参考该文件获取物模型模板、通信协议代码片段、指令协议模式和常见错误检查清单。
本提示词中的「现有设备接口快照」和「硬约束」是从指南中提炼的关键内容,以确保即使知识库检索不完整也能正确工作。
```
### 方案 B有联网能力
```
执行工作流前,从以下 URL 获取完整的设备接入指南:
https://raw.githubusercontent.com/dptech-corp/Uni-Lab-OS/main/docs/ai_guides/add_device.md
该指南包含物模型模板、通信协议代码片段、指令协议模式和常见错误检查清单。
如果无法访问 URL使用本提示词中内联的「现有设备接口快照」和「代码骨架参考」作为兜底。
```
### 方案 C无知识库、无联网
```
完整的设备接入指南需要用户在对话中提供。
如果用户未主动提供,请在阶段 1 开始前询问:
"请将 add_device.md 的内容粘贴到对话中,或上传该文件。如果没有该文件,我将使用内置的精简规则工作。"
本提示词已内联了最关键的内容(硬约束 + 代码骨架 + 接口快照),足以生成基本正确的驱动。
但完整指南包含更多物模型模板和通信协议代码片段,能显著提升生成质量。
```
---
## 各平台配置指南
### OpenAI Custom GPT
1. 进入 https://chat.openai.com/gpts/editor
2. **Name**Uni-Lab-OS 设备接入助手
3. **Description**:帮助用户将实验室硬件设备接入 Uni-Lab-OS 系统,自动生成驱动代码、注册表和图文件。
4. **Instructions**:粘贴上方系统提示词,`{{KNOWLEDGE_LOADING}}` 替换为方案 A
5. **Knowledge**:上传 `docs/ai_guides/add_device.md`
6. **Capabilities**:开启 Code Interpreter用于代码验证
7. **Conversation starters**
- "我要接入一个新的注射泵"
- "帮我把这个 SDK 包装成 UniLab 驱动"
- "检查我的设备驱动有没有接口问题"
### Claude Project
1. 创建新 Project
2. **Custom Instructions**:粘贴系统提示词,`{{KNOWLEDGE_LOADING}}` 替换为方案 A
3. **Project Knowledge**:上传 `docs/ai_guides/add_device.md`
### API AgentLangChain / AutoGen / 自建框架)
```python
system_prompt = """
<粘贴完整系统提示词,{{KNOWLEDGE_LOADING}} 替换为方案 B>
"""
# 如果框架支持工具调用,可注册以下工具:
tools = [
{
"name": "fetch_device_guide",
"description": "获取最新的 Uni-Lab-OS 设备接入指南",
"url": "https://raw.githubusercontent.com/dptech-corp/Uni-Lab-OS/main/docs/ai_guides/add_device.md"
},
{
"name": "fetch_registry",
"description": "获取最新的设备注册表",
"url": "https://raw.githubusercontent.com/dptech-corp/Uni-Lab-OS/main/unilabos/registry/devices/{category}.yaml"
},
]
```
### Cursor Agent Mode
无需使用本模板。Cursor 中使用已有的 `.cursor/skills/add-device/SKILL.md`,它会自动读取 `docs/ai_guides/add_device.md` 并利用 Cursor 的工具能力Grep 搜索注册表、AskQuestion 收集信息等)。
### 纯网页对话ChatGPT / Claude 无 Project
1. 第一条消息粘贴系统提示词(`{{KNOWLEDGE_LOADING}}` 替换为方案 C
2. 第二条消息上传或粘贴 `add_device.md`
3. 第三条消息开始描述设备
---
## 维护说明
- **硬约束更新**:如果 `add_device.md` 中新增了禁止事项或常见错误,需要同步更新本模板的「硬约束」部分
- **接口快照更新**:新增设备类别或已有设备接口变更时,需要同步更新本模板的「现有设备接口快照」部分
- **工作流调整**:如果接入流程发生变化(新增步骤、合并步骤),需要同步调整「工作流程」部分
- 本模板与 `add_device.md` 是**互补关系**:模板定义 Agent 行为,指南提供领域知识。两者独立维护

View File

@@ -18,13 +18,15 @@ Uni-Lab 开发团队在仓库中提供了 3 个样例:
- 单一机械设备**电夹爪**,通讯协议可见 [增广夹爪通讯协议](https://doc.rmaxis.com/docs/communication/fieldbus/),驱动代码位于 `unilabos/devices/gripper/rmaxis_v4.py`
- 单一通信设备**IO 板卡**,驱动代码位于 `unilabos/device_comms/gripper/SRND_16_IO.py`
- 执行多设备复杂任务逻辑的**PLC**Uni-Lab 提供了基于地址表的接入方式和点动工作流编写,测试代码位于 `unilabos/device_comms/modbus_plc/test/test_workflow.py`
- 执行多设备复杂任务逻辑的**PLC**Uni-Lab 提供了基于地址表的接入方式和点动工作流编写,测试代码位于 `unilabos/device_comms/modbus_plc/test/test_workflow.py`。详细框架说明请参考 {doc}`plc_framework`
---
## 其他工业通信协议CANopen, Ethernet, OPCUA...
【敬请期待】
Uni-Lab 已实现基于 OPC UA 协议的 PLC 接管框架,用于后处理工站等项目。与 Modbus 框架相比OPC UA 框架额外提供了自动节点发现、订阅推送、断线重连等特性。详细说明请参考 {doc}`plc_framework`
其他协议CANopen、EtherCAT 等)【敬请期待】
## 没有接口的老设备老软件:使用 PyWinAuto

View File

@@ -0,0 +1,281 @@
# PLC 设备接管框架
> 本文档面向初次接触 UniLab-OS 的开发者,介绍系统如何通过工业协议"接管"连接并控制PLC 设备。
## 什么是"PLC 接管"
**PLC**可编程逻辑控制器是工厂设备的控制核心驱动机械臂、泵、阀门等硬件。UniLab-OS 通过网络协议直接读写 PLC 内部变量,从而控制设备运行:
```
UniLab-OSPython ←通信协议→ PLC ←电信号→ 电机/气缸/传感器
```
UniLab-OS 提供两套接管框架,对应两种工业协议:
| 框架 | 协议 | 应用项目 | 核心文件 |
| --------------- | ---------------- | ------------------ | ----------------------------------------------------------- |
| **Modbus 框架** | Modbus TCP / RTU | 扣式电池装配工站 | `unilabos/device_comms/modbus_plc/client.py` |
| **OPC UA 框架** | OPC UA | 后处理工站(怀柔) | `unilabos/devices/workstation/post_process/post_process.py` |
两套框架**设计思想完全一致**,底层通信协议不同。理解一个,另一个基本触类旁通。
---
## 核心概念
### 节点Node
节点是 PLC 内部一个具体的变量地址,可以理解为 PLC 的一个输入/输出端口。
| 属性 | 说明 | 示例 |
| ---- | -------------------------------------- | -------------------- |
| 名称 | 人类可读标识 | `COIL_SYS_START_CMD` |
| 地址 | PLC 内存地址 | `0x0064` |
| 类型 | Coil / HoldRegister / InputRegister 等 | `coil` |
```
PLC 内存空间
├── Coil 区: True / False ← 控制开关量(启动/停止/复位)
├── Hold Reg: 120, 35.5 … ← 存参数值(速度、位置)
└── Input Reg: 99.8, 42 … ← 只读传感器数据
```
### 动作生命周期Action Lifecycle
每个设备动作被拆分为 4 个阶段,用 `try/finally` 保证安全性:
```python
try:
init(...) # 写入参数(速度、位置等)— 可选
start(...) # 发触发信号 + 轮询等待完成
stop(...) # 复位触发信号(成功时执行)
except:
is_err = True
finally:
cleanup(...) # 无论成败都执行,作为安全兜底
```
| 阶段 | 何时执行 | 典型内容 |
| --------- | ----------------------- | ------------------------------------ |
| `init` | 成功路径(可选) | 写运动速度 = 20.0 |
| `start` | 成功路径 | 写启动位 = True等待完成位 = True |
| `stop` | 成功路径 | 写启动位 = False正常复位 |
| `cleanup` | **无论成败**finally | 安全兜底复位,防止异常时设备持续运动 |
> **为什么 `cleanup` 无论成败都执行?**
> 若 `start` 阶段因传感器故障抛出异常,`stop` 会被跳过PLC 触发位仍为 `True`——设备可能持续运动。`cleanup` 放在 `finally` 块中,作为最后的安全保障,确保 PLC 一定被复位到安全状态。实际上大多数动作将 `cleanup` 设为 `null`,由 `stop` 负责正常复位即可。
---
## Modbus 框架
**核心文件**`unilabos/device_comms/modbus_plc/client.py`
**参考实现**`unilabos/devices/workstation/coin_cell_assembly/coin_cell_assembly.py`
### 连接与节点注册
```python
from unilabos.device_comms.modbus_plc.client import TCPClient, BaseClient
# 1. 建立 TCP 连接
client = TCPClient(addr="172.16.28.102", port=502)
client.client.connect()
# 2. 从 CSV 加载节点定义
nodes = BaseClient.load_csv("coin_cell_assembly_b.csv")
# 3. 注册节点,之后可按名称访问
client.register_node_list(nodes)
# 访问节点
client.use_node('COIL_SYS_START_CMD').write(True)
value, err = client.use_node('COIL_SYS_START_STATUS').read(1)
```
**CSV 格式**`Name` / `DeviceType` / `Address` / `DataType`
| Name | DeviceType | Address | DataType |
| ------------------ | ------------- | ------- | -------- |
| COIL_SYS_START_CMD | coil | 100 | INT16 |
| REG_SPEED | hold_register | 200 | FLOAT32 |
### 三段式接管流程(扣式电池工站)
PLC 设备通常需要按固定顺序切换模式,以扣式电池工站为例:
```
Python PLC
│── 写 HAND_CMD = True ─────────>│ 切换到手动模式
│<─ 读 HAND_STATUS = True ────────│ 确认进入手动
│── 写 INIT_CMD = True ──────────>│ 执行初始化
│<─ 读 INIT_STATUS = True ─────────│ 初始化完成
│── 写 HAND_CMD = False ──────────>│ 复位(脉冲信号)
│── 写 INIT_CMD = False ──────────>│ 复位
│── 写 AUTO_CMD = True ───────────>│ 切换自动模式
│<─ 读 AUTO_STATUS = True ─────────│ 自动模式就绪
│── 写 AUTO_CMD = False ──────────>│ 复位
│── 写 START_CMD = True ──────────>│ 开始运行
│<─ 读 START_STATUS = True ────────│ 运行确认
│── 写 START_CMD = False ──────────>│ 复位
```
> **脉冲信号模式**:命令写 `True` → 等待 PLC 状态位确认 → 命令写回 `False`,这是大多数 PLC 的标准触发方式,而不是保持高电平。
### JSON 配置方式
Modbus 框架支持纯 JSON 配置,无需手写 Python 流程:
```json
{
"register_node_list_from_csv_path": {"path": "M01.csv"},
"create_flow": [
{
"name": "归位",
"action": [{
"address_function_to_create": [
{"func_name": "pos_tip", "node_name": "M01_idlepos_coil_w", "mode": "write", "value": true},
{"func_name": "pos_tip_read", "node_name": "M01_idlepos_coil_r", "mode": "read", "value": 1},
{"func_name": "manual_stop", "node_name": "M01_manual_stop_coil_r","mode": "read", "value": 1}
],
"create_init_function": {"func_name": "idel_init", "node_name": "M01_idlepos_velocity_rw", "mode": "write", "value": 20.0},
"create_start_function": {
"func_name": "idel_position",
"write_functions": ["pos_tip"],
"condition_functions": ["pos_tip_read", "manual_stop"],
"stop_condition_expression": "pos_tip_read[0] and manual_stop[0]"
},
"create_stop_function": {"func_name": "idel_stop", "node_name": "M01_idlepos_coil_w", "mode": "write", "value": false},
"create_cleanup_function": null
}]
}
],
"execute_flow": ["归位"]
}
```
执行:
```python
client.execute_procedure_from_json(json_data)
```
---
## OPC UA 框架
**核心文件**`unilabos/devices/workstation/post_process/post_process.py`
**参考实现**`unilabos/devices/workstation/post_process/opcua_huairou.json`
### 与 Modbus 的主要区别
| 特性 | Modbus | OPC UA |
| ---------- | -------------------- | --------------------------------- |
| 节点发现 | 手动填写 CSV 地址 | **自动遍历**服务器节点树 |
| 数据获取 | 轮询(主动问) | **订阅推送**(有变化时通知) |
| 节点标识 | 数字地址(如 `100` | 字符串 NodeId`ns=2;s=速度` |
| 断线处理 | 无 | **后台监控线程**自动重连 |
| 认证安全 | 无 | 支持用户名/密码 |
| 工作流调用 | 手动调用 | **自动注册为实例方法** |
### 连接与节点发现
```python
from unilabos.devices.workstation.post_process.post_process import OpcUaClient
client = OpcUaClient(
url="opc.tcp://192.168.1.100:4840",
username="admin", # 可选
password="123456", # 可选
config_path="opcua_huairou.json", # 自动加载工作流配置
cache_timeout=5.0, # 节点值缓存 5 秒
subscription_interval=500, # 每 500ms 接收推送
)
# 节点自动通过订阅保持最新值,读取直接查本地缓存
value = client.get_node_value("grab_complete")
```
### JSON 配置方式
```json
{
"register_node_list_from_csv_path": {"path": "opcua_nodes_huairou.csv"},
"create_flow": [
{
"name": "trigger_grab_action",
"description": "触发反应罐及原料罐抓取动作",
"parameters": ["reaction_tank_number", "raw_tank_number"],
"action": [{
"init_function": {
"func_name": "init_grab_params",
"write_nodes": ["reaction_tank_number", "raw_tank_number"]
},
"start_function": {
"func_name": "start_grab",
"write_nodes": {"grab_trigger": true},
"condition_nodes": ["grab_complete"],
"stop_condition_expression": "grab_complete == True",
"timeout_seconds": 999999.0
},
"stop_function": {
"func_name": "stop_grab",
"write_nodes": {"grab_trigger": false}
}
}]
}
]
}
```
配置加载后,工作流自动注册为实例方法:
```python
# 直接调用,传入参数,框架自动写入对应节点
client.trigger_grab_action(reaction_tank_number=2, raw_tank_number=3)
```
---
## 新增设备快速上手
### 使用 Modbus 框架
```
1. 从 PLC 工程师处拿到地址表,按格式填写 CSVName/DeviceType/Address/DataType
2. 继承 BaseClient在 __init__ 中连接并注册节点
3. 参考 coin_cell_assembly.py 编写三段式接管函数(手动→初始化→自动→启动)
4. 或直接编写 JSON 配置,调用 execute_procedure_from_json()
```
### 使用 OPC UA 框架
```
1. 确认设备支持 OPC UA拿到服务器 URL格式opc.tcp://IP:PORT
2. 准备 CSV 节点定义文件(可选,也可让框架自动发现)
3. 编写 JSON 配置:定义 parameters、init/start/stop 函数
4. 实例化 OpcUaClient传入 config_path直接调用自动注册的工作流方法
```
---
## 常见问题
**Q: `node {name} is not registered` 报错?**
A: 节点名不在 CSV 或未调用 `register_node_list_from_csv_path()`
**Q: 程序卡死在 `while not status(): sleep(1)`**
A: PLC 未返回预期完成信号。检查PLC 是否在正确运行模式、状态位地址是否正确、PLC 有无报警。
**Q: OPC UA 连接成功但读不到节点?**
A: 检查节点名称是否与服务器显示名一致(区分中英文)。可调用 `_find_nodes()` 打印服务器全部节点。
**Q: 应该选 Modbus 还是 OPC UA**
A: 取决于设备支持的协议,由 PLC 工程师决定。OPC UA 功能更完整,条件允许优先选择。
---
## 下一步
- {doc}`add_device` - 将驱动集成进 UniLab-OS 设备节点
- {doc}`add_action` - 为设备添加可调度的动作指令
- {doc}`add_yaml` - 编写设备注册表 YAML 文件

View File

@@ -17,6 +17,9 @@ developer_guide/http_api.md
developer_guide/networking_overview.md
developer_guide/add_device.md
developer_guide/add_action.md
developer_guide/add_old_device.md
developer_guide/plc_framework.md
developer_guide/add_protocol.md
developer_guide/add_registry.md
developer_guide/add_yaml.md
developer_guide/action_includes.md

View File

@@ -1,9 +1,7 @@
"""
LaiYu液体处理设备后端模块
提供设备后端接口和实现
"""
from .laiyu_backend import LaiYuLiquidBackend, create_laiyu_backend
from .laiyu_v_backend import UniLiquidHandlerLaiyuBackend
__all__ = ['LaiYuLiquidBackend', 'create_laiyu_backend']
__all__ = ['UniLiquidHandlerLaiyuBackend']

View File

@@ -1,334 +0,0 @@
"""
LaiYu液体处理设备后端实现
提供设备的后端接口和控制逻辑
"""
import logging
from typing import Dict, Any, Optional, List
from abc import ABC, abstractmethod
# 尝试导入PyLabRobot后端
try:
from pylabrobot.liquid_handling.backends import LiquidHandlerBackend
PYLABROBOT_AVAILABLE = True
except ImportError:
PYLABROBOT_AVAILABLE = False
# 创建模拟后端基类
class LiquidHandlerBackend:
def __init__(self, name: str):
self.name = name
self.is_connected = False
def connect(self):
"""连接设备"""
pass
def disconnect(self):
"""断开连接"""
pass
class LaiYuLiquidBackend(LiquidHandlerBackend):
"""LaiYu液体处理设备后端"""
def __init__(self, name: str = "LaiYu_Liquid_Backend"):
"""
初始化LaiYu液体处理设备后端
Args:
name: 后端名称
"""
if PYLABROBOT_AVAILABLE:
# PyLabRobot 的 LiquidHandlerBackend 不接受参数
super().__init__()
else:
# 模拟版本接受 name 参数
super().__init__(name)
self.name = name
self.logger = logging.getLogger(__name__)
self.is_connected = False
self.device_info = {
"name": "LaiYu液体处理设备",
"version": "1.0.0",
"manufacturer": "LaiYu",
"model": "LaiYu_Liquid_Handler"
}
def connect(self) -> bool:
"""
连接到LaiYu液体处理设备
Returns:
bool: 连接是否成功
"""
try:
self.logger.info("正在连接到LaiYu液体处理设备...")
# 这里应该实现实际的设备连接逻辑
# 目前返回模拟连接成功
self.is_connected = True
self.logger.info("成功连接到LaiYu液体处理设备")
return True
except Exception as e:
self.logger.error(f"连接LaiYu液体处理设备失败: {e}")
self.is_connected = False
return False
def disconnect(self) -> bool:
"""
断开与LaiYu液体处理设备的连接
Returns:
bool: 断开连接是否成功
"""
try:
self.logger.info("正在断开与LaiYu液体处理设备的连接...")
# 这里应该实现实际的设备断开连接逻辑
self.is_connected = False
self.logger.info("成功断开与LaiYu液体处理设备的连接")
return True
except Exception as e:
self.logger.error(f"断开LaiYu液体处理设备连接失败: {e}")
return False
def is_device_connected(self) -> bool:
"""
检查设备是否已连接
Returns:
bool: 设备是否已连接
"""
return self.is_connected
def get_device_info(self) -> Dict[str, Any]:
"""
获取设备信息
Returns:
Dict[str, Any]: 设备信息字典
"""
return self.device_info.copy()
def home_device(self) -> bool:
"""
设备归零操作
Returns:
bool: 归零是否成功
"""
if not self.is_connected:
self.logger.error("设备未连接,无法执行归零操作")
return False
try:
self.logger.info("正在执行设备归零操作...")
# 这里应该实现实际的设备归零逻辑
self.logger.info("设备归零操作完成")
return True
except Exception as e:
self.logger.error(f"设备归零操作失败: {e}")
return False
def aspirate(self, volume: float, location: Dict[str, Any]) -> bool:
"""
吸液操作
Args:
volume: 吸液体积 (微升)
location: 吸液位置信息
Returns:
bool: 吸液是否成功
"""
if not self.is_connected:
self.logger.error("设备未连接,无法执行吸液操作")
return False
try:
self.logger.info(f"正在执行吸液操作: 体积={volume}μL, 位置={location}")
# 这里应该实现实际的吸液逻辑
self.logger.info("吸液操作完成")
return True
except Exception as e:
self.logger.error(f"吸液操作失败: {e}")
return False
def dispense(self, volume: float, location: Dict[str, Any]) -> bool:
"""
排液操作
Args:
volume: 排液体积 (微升)
location: 排液位置信息
Returns:
bool: 排液是否成功
"""
if not self.is_connected:
self.logger.error("设备未连接,无法执行排液操作")
return False
try:
self.logger.info(f"正在执行排液操作: 体积={volume}μL, 位置={location}")
# 这里应该实现实际的排液逻辑
self.logger.info("排液操作完成")
return True
except Exception as e:
self.logger.error(f"排液操作失败: {e}")
return False
def pick_up_tip(self, location: Dict[str, Any]) -> bool:
"""
取枪头操作
Args:
location: 枪头位置信息
Returns:
bool: 取枪头是否成功
"""
if not self.is_connected:
self.logger.error("设备未连接,无法执行取枪头操作")
return False
try:
self.logger.info(f"正在执行取枪头操作: 位置={location}")
# 这里应该实现实际的取枪头逻辑
self.logger.info("取枪头操作完成")
return True
except Exception as e:
self.logger.error(f"取枪头操作失败: {e}")
return False
def drop_tip(self, location: Dict[str, Any]) -> bool:
"""
丢弃枪头操作
Args:
location: 丢弃位置信息
Returns:
bool: 丢弃枪头是否成功
"""
if not self.is_connected:
self.logger.error("设备未连接,无法执行丢弃枪头操作")
return False
try:
self.logger.info(f"正在执行丢弃枪头操作: 位置={location}")
# 这里应该实现实际的丢弃枪头逻辑
self.logger.info("丢弃枪头操作完成")
return True
except Exception as e:
self.logger.error(f"丢弃枪头操作失败: {e}")
return False
def move_to(self, location: Dict[str, Any]) -> bool:
"""
移动到指定位置
Args:
location: 目标位置信息
Returns:
bool: 移动是否成功
"""
if not self.is_connected:
self.logger.error("设备未连接,无法执行移动操作")
return False
try:
self.logger.info(f"正在移动到位置: {location}")
# 这里应该实现实际的移动逻辑
self.logger.info("移动操作完成")
return True
except Exception as e:
self.logger.error(f"移动操作失败: {e}")
return False
def get_status(self) -> Dict[str, Any]:
"""
获取设备状态
Returns:
Dict[str, Any]: 设备状态信息
"""
return {
"connected": self.is_connected,
"device_info": self.device_info,
"status": "ready" if self.is_connected else "disconnected"
}
# PyLabRobot 抽象方法实现
def stop(self):
"""停止所有操作"""
self.logger.info("停止所有操作")
pass
@property
def num_channels(self) -> int:
"""返回通道数量"""
return 1 # 单通道移液器
def can_pick_up_tip(self, tip_rack, tip_position) -> bool:
"""检查是否可以拾取吸头"""
return True # 简化实现总是返回True
def pick_up_tips(self, tip_rack, tip_positions):
"""拾取多个吸头"""
self.logger.info(f"拾取吸头: {tip_positions}")
pass
def drop_tips(self, tip_rack, tip_positions):
"""丢弃多个吸头"""
self.logger.info(f"丢弃吸头: {tip_positions}")
pass
def pick_up_tips96(self, tip_rack):
"""拾取96个吸头"""
self.logger.info("拾取96个吸头")
pass
def drop_tips96(self, tip_rack):
"""丢弃96个吸头"""
self.logger.info("丢弃96个吸头")
pass
def aspirate96(self, volume, plate, well_positions):
"""96通道吸液"""
self.logger.info(f"96通道吸液: 体积={volume}")
pass
def dispense96(self, volume, plate, well_positions):
"""96通道排液"""
self.logger.info(f"96通道排液: 体积={volume}")
pass
def pick_up_resource(self, resource, location):
"""拾取资源"""
self.logger.info(f"拾取资源: {resource}")
pass
def drop_resource(self, resource, location):
"""放置资源"""
self.logger.info(f"放置资源: {resource}")
pass
def move_picked_up_resource(self, resource, location):
"""移动已拾取的资源"""
self.logger.info(f"移动资源: {resource}{location}")
pass
def create_laiyu_backend(name: str = "LaiYu_Liquid_Backend") -> LaiYuLiquidBackend:
"""
创建LaiYu液体处理设备后端实例
Args:
name: 后端名称
Returns:
LaiYuLiquidBackend: 后端实例
"""
return LaiYuLiquidBackend(name)

View File

@@ -1,385 +1,307 @@
import json
"""LaiYu PLR 后端 — 对齐路径 B 硬件交互模式
硬件初始化顺序与 laiyu_liquid_station.py (路径 B) 一致:
1. XYZController(auto_connect=True) — 先开串口
2. PipetteController.connect_shared() — 共享 XYZ 的串口 / 锁
3. home_all_axes() + pipette.initialize()
"""
import logging
from typing import List, Optional, Union
from pylabrobot.liquid_handling.backends.backend import (
LiquidHandlerBackend,
)
from pylabrobot.liquid_handling.backends.backend import LiquidHandlerBackend
from pylabrobot.liquid_handling.standard import (
Drop,
DropTipRack,
MultiHeadAspirationContainer,
MultiHeadAspirationPlate,
MultiHeadDispenseContainer,
MultiHeadDispensePlate,
Pickup,
PickupTipRack,
ResourceDrop,
ResourceMove,
ResourcePickup,
SingleChannelAspiration,
SingleChannelDispense,
Drop,
DropTipRack,
MultiHeadAspirationContainer,
MultiHeadAspirationPlate,
MultiHeadDispenseContainer,
MultiHeadDispensePlate,
Pickup,
PickupTipRack,
ResourceDrop,
ResourceMove,
ResourcePickup,
SingleChannelAspiration,
SingleChannelDispense,
)
from pylabrobot.resources import Resource, Tip
import rclpy
from rclpy.node import Node
from sensor_msgs.msg import JointState
import time
from rclpy.action import ActionClient
from unilabos_msgs.action import SendCmd
import re
from unilabos.devices.liquid_handling.laiyu.controllers.xyz_controller import XYZController
from unilabos.devices.liquid_handling.laiyu.controllers.pipette_controller import (
PipetteController,
TipStatus,
)
from unilabos.devices.ros_dev.liquid_handler_joint_publisher import JointStatePublisher
from unilabos.devices.liquid_handling.laiyu.controllers.pipette_controller import PipetteController, TipStatus
logger = logging.getLogger(__name__)
class UniLiquidHandlerLaiyuBackend(LiquidHandlerBackend):
"""Chatter box backend for device-free testing. Prints out all operations."""
"""LaiYu 硬件后端 — PLR Backend 接口实现"""
_pip_length = 5
_vol_length = 8
_resource_length = 20
_offset_length = 16
_flow_rate_length = 10
_blowout_length = 10
_lld_z_length = 10
_kwargs_length = 15
_tip_type_length = 12
_max_volume_length = 16
_fitting_depth_length = 20
_tip_length_length = 16
# _pickup_method_length = 20
_filter_length = 10
def __init__(
self,
num_channels: int = 1,
tip_length: float = 0,
total_height: float = 310,
port: str = "/dev/ttyUSB0",
baudrate: int = 115200,
pipette_address: int = 4,
):
super().__init__()
self._num_channels = num_channels
self.tip_length = tip_length
self.total_height = total_height
def __init__(self, num_channels: int = 8 , tip_length: float = 0 , total_height: float = 310, port: str = "/dev/ttyUSB0"):
"""Initialize a chatter box backend."""
super().__init__()
self._num_channels = num_channels
self.tip_length = tip_length
self.total_height = total_height
# rclpy.init()
if not rclpy.ok():
rclpy.init()
self.joint_state_publisher = None
self.hardware_interface = PipetteController(port=port)
# 保存配置,延迟到 setup() 再创建硬件对象
self._port = port
self._baudrate = baudrate
self._pipette_address = pipette_address
async def setup(self):
# self.joint_state_publisher = JointStatePublisher()
# self.hardware_interface.xyz_controller.connect_device()
# self.hardware_interface.xyz_controller.home_all_axes()
await super().setup()
self.hardware_interface.connect()
self.hardware_interface.initialize()
self._xyz: Optional[XYZController] = None
self._pipette_ctrl: Optional[PipetteController] = None
self._ros_node = None
print("Setting up the liquid handler.")
# ------------------------------------------------------------------ lifecycle
async def stop(self):
print("Stopping the liquid handler.")
def post_init(self, ros_node):
"""接收 ROS 节点引用(由 Handler.post_init 调用)"""
self._ros_node = ros_node
def serialize(self) -> dict:
return {**super().serialize(), "num_channels": self.num_channels}
async def setup(self):
"""按路径 B 顺序初始化硬件"""
await super().setup()
def pipette_aspirate(self, volume: float, flow_rate: float):
# 1. XYZ 先开串口
self._xyz = XYZController(
port=self._port,
baudrate=self._baudrate,
auto_connect=True,
)
if not self._xyz.is_connected:
raise RuntimeError("XYZ 控制器连接失败")
self.hardware_interface.pipette.set_max_speed(flow_rate)
res = self.hardware_interface.pipette.aspirate(volume=volume)
if not res:
self.hardware_interface.logger.error("吸取失败,当前体积: {self.hardware_interface.current_volume}")
return
# 2. PipetteController 共享 XYZ 串口
self._pipette_ctrl = PipetteController(
port=self._port,
address=self._pipette_address,
)
self._pipette_ctrl.connect_shared(
serial_conn=self._xyz.serial_conn,
serial_lock=self._xyz.serial_lock,
xyz_controller=self._xyz,
)
self.hardware_interface.current_volume += volume
# 3. 回零 + 移液器初始化
self._xyz.home_all_axes()
self._pipette_ctrl.initialize()
def pipette_dispense(self, volume: float, flow_rate: float):
logger.info("LaiYu 后端硬件初始化完成")
self.hardware_interface.pipette.set_max_speed(flow_rate)
res = self.hardware_interface.pipette.dispense(volume=volume)
if not res:
self.hardware_interface.logger.error("排液失败,当前体积: {self.hardware_interface.current_volume}")
return
self.hardware_interface.current_volume -= volume
async def stop(self):
"""正确断开硬件"""
try:
if self._pipette_ctrl:
self._pipette_ctrl.disconnect_shared()
if self._xyz:
self._xyz.disconnect()
logger.info("LaiYu 后端硬件已断开")
except Exception as e:
logger.error(f"停止后端失败: {e}")
@property
def num_channels(self) -> int:
return self._num_channels
# ------------------------------------------------------------------ helpers
async def assigned_resource_callback(self, resource: Resource):
print(f"Resource {resource.name} was assigned to the liquid handler.")
def _plr_to_machine_coords(self, resource, offset):
"""PLR Resource 坐标 → 机器坐标 (倒置龙门架: total_height - z, -y)"""
coordinate = resource.get_absolute_location(x="c", y="c")
x = coordinate.x + offset.x
y = coordinate.y + offset.y
z_plr = coordinate.z + offset.z
return x, -y, self.total_height - (z_plr + self.tip_length)
async def unassigned_resource_callback(self, name: str):
print(f"Resource {name} was unassigned from the liquid handler.")
def _pipette_aspirate(self, volume: float, flow_rate: float):
self._pipette_ctrl.pipette.set_max_speed(flow_rate)
res = self._pipette_ctrl.pipette.aspirate(volume=volume)
if not res:
logger.error(f"吸取失败,当前体积: {self._pipette_ctrl.current_volume}")
return
self._pipette_ctrl.current_volume += volume
async def pick_up_tips(self, ops: List[Pickup], use_channels: List[int], **backend_kwargs):
print("Picking up tips:")
# print(ops.tip)
header = (
f"{'pip#':<{UniLiquidHandlerLaiyuBackend._pip_length}} "
f"{'resource':<{UniLiquidHandlerLaiyuBackend._resource_length}} "
f"{'offset':<{UniLiquidHandlerLaiyuBackend._offset_length}} "
f"{'tip type':<{UniLiquidHandlerLaiyuBackend._tip_type_length}} "
f"{'max volume (µL)':<{UniLiquidHandlerLaiyuBackend._max_volume_length}} "
f"{'fitting depth (mm)':<{UniLiquidHandlerLaiyuBackend._fitting_depth_length}} "
f"{'tip length (mm)':<{UniLiquidHandlerLaiyuBackend._tip_length_length}} "
# f"{'pickup method':<{ChatterboxBackend._pickup_method_length}} "
f"{'filter':<{UniLiquidHandlerLaiyuBackend._filter_length}}"
)
# print(header)
def _pipette_dispense(self, volume: float, flow_rate: float):
self._pipette_ctrl.pipette.set_max_speed(flow_rate)
res = self._pipette_ctrl.pipette.dispense(volume=volume)
if not res:
logger.error(f"排液失败,当前体积: {self._pipette_ctrl.current_volume}")
return
self._pipette_ctrl.current_volume -= volume
for op, channel in zip(ops, use_channels):
offset = f"{round(op.offset.x, 1)},{round(op.offset.y, 1)},{round(op.offset.z, 1)}"
row = (
f" p{channel}: "
f"{op.resource.name[-30:]:<{UniLiquidHandlerLaiyuBackend._resource_length}} "
f"{offset:<{UniLiquidHandlerLaiyuBackend._offset_length}} "
f"{op.tip.__class__.__name__:<{UniLiquidHandlerLaiyuBackend._tip_type_length}} "
f"{op.tip.maximal_volume:<{UniLiquidHandlerLaiyuBackend._max_volume_length}} "
f"{op.tip.fitting_depth:<{UniLiquidHandlerLaiyuBackend._fitting_depth_length}} "
f"{op.tip.total_tip_length:<{UniLiquidHandlerLaiyuBackend._tip_length_length}} "
# f"{str(op.tip.pickup_method)[-20:]:<{ChatterboxBackend._pickup_method_length}} "
f"{'Yes' if op.tip.has_filter else 'No':<{UniLiquidHandlerLaiyuBackend._filter_length}}"
)
# print(row)
# print(op.resource.get_absolute_location())
self.tip_length = ops[0].tip.total_tip_length
coordinate = ops[0].resource.get_absolute_location(x="c",y="c")
offset_xyz = ops[0].offset
x = coordinate.x + offset_xyz.x
y = coordinate.y + offset_xyz.y
z = self.total_height - (coordinate.z + self.tip_length) + offset_xyz.z
# print("moving")
self.hardware_interface._update_tip_status()
if self.hardware_interface.tip_status == TipStatus.TIP_ATTACHED:
print("已有枪头,无需重复拾取")
return
self.hardware_interface.xyz_controller.move_to_work_coord_safe(x=x, y=-y, z=z,speed=200)
self.hardware_interface.xyz_controller.move_to_work_coord_safe(z=self.hardware_interface.xyz_controller.machine_config.safe_z_height,speed=100)
# self.joint_state_publisher.send_resource_action(ops[0].resource.name, x, y, z, "pick",channels=use_channels)
# goback()
# ------------------------------------------------------------------ properties
def serialize(self) -> dict:
return {**super().serialize(), "num_channels": self.num_channels}
@property
def num_channels(self) -> int:
return self._num_channels
# ------------------------------------------------------------------ resource callbacks
async def drop_tips(self, ops: List[Drop], use_channels: List[int], **backend_kwargs):
print("Dropping tips:")
header = (
f"{'pip#':<{UniLiquidHandlerLaiyuBackend._pip_length}} "
f"{'resource':<{UniLiquidHandlerLaiyuBackend._resource_length}} "
f"{'offset':<{UniLiquidHandlerLaiyuBackend._offset_length}} "
f"{'tip type':<{UniLiquidHandlerLaiyuBackend._tip_type_length}} "
f"{'max volume (µL)':<{UniLiquidHandlerLaiyuBackend._max_volume_length}} "
f"{'fitting depth (mm)':<{UniLiquidHandlerLaiyuBackend._fitting_depth_length}} "
f"{'tip length (mm)':<{UniLiquidHandlerLaiyuBackend._tip_length_length}} "
# f"{'pickup method':<{ChatterboxBackend._pickup_method_length}} "
f"{'filter':<{UniLiquidHandlerLaiyuBackend._filter_length}}"
)
# print(header)
async def assigned_resource_callback(self, resource: Resource):
logger.info(f"Resource {resource.name} was assigned to the liquid handler.")
for op, channel in zip(ops, use_channels):
offset = f"{round(op.offset.x, 1)},{round(op.offset.y, 1)},{round(op.offset.z, 1)}"
row = (
f" p{channel}: "
f"{op.resource.name[-30:]:<{UniLiquidHandlerLaiyuBackend._resource_length}} "
f"{offset:<{UniLiquidHandlerLaiyuBackend._offset_length}} "
f"{op.tip.__class__.__name__:<{UniLiquidHandlerLaiyuBackend._tip_type_length}} "
f"{op.tip.maximal_volume:<{UniLiquidHandlerLaiyuBackend._max_volume_length}} "
f"{op.tip.fitting_depth:<{UniLiquidHandlerLaiyuBackend._fitting_depth_length}} "
f"{op.tip.total_tip_length:<{UniLiquidHandlerLaiyuBackend._tip_length_length}} "
# f"{str(op.tip.pickup_method)[-20:]:<{ChatterboxBackend._pickup_method_length}} "
f"{'Yes' if op.tip.has_filter else 'No':<{UniLiquidHandlerLaiyuBackend._filter_length}}"
)
# print(row)
async def unassigned_resource_callback(self, name: str):
logger.info(f"Resource {name} was unassigned from the liquid handler.")
coordinate = ops[0].resource.get_absolute_location(x="c",y="c")
offset_xyz = ops[0].offset
x = coordinate.x + offset_xyz.x
y = coordinate.y + offset_xyz.y
z = self.total_height - (coordinate.z + self.tip_length) + offset_xyz.z -20
# print(x, y, z)
# print("moving")
self.hardware_interface._update_tip_status()
if self.hardware_interface.tip_status == TipStatus.NO_TIP:
print("无枪头,无需丢弃")
return
self.hardware_interface.xyz_controller.move_to_work_coord_safe(x=x, y=-y, z=z,speed=200)
self.hardware_interface.eject_tip
self.hardware_interface.xyz_controller.move_to_work_coord_safe(z=self.hardware_interface.xyz_controller.machine_config.safe_z_height)
# ------------------------------------------------------------------ pick_up_tips
async def aspirate(
self,
ops: List[SingleChannelAspiration],
use_channels: List[int],
**backend_kwargs,
):
print("Aspirating:")
header = (
f"{'pip#':<{UniLiquidHandlerLaiyuBackend._pip_length}} "
f"{'vol(ul)':<{UniLiquidHandlerLaiyuBackend._vol_length}} "
f"{'resource':<{UniLiquidHandlerLaiyuBackend._resource_length}} "
f"{'offset':<{UniLiquidHandlerLaiyuBackend._offset_length}} "
f"{'flow rate':<{UniLiquidHandlerLaiyuBackend._flow_rate_length}} "
f"{'blowout':<{UniLiquidHandlerLaiyuBackend._blowout_length}} "
f"{'lld_z':<{UniLiquidHandlerLaiyuBackend._lld_z_length}} "
# f"{'liquids':<20}" # TODO: add liquids
)
for key in backend_kwargs:
header += f"{key:<{UniLiquidHandlerLaiyuBackend._kwargs_length}} "[-16:]
# print(header)
async def pick_up_tips(self, ops: List[Pickup], use_channels: List[int], **backend_kwargs):
tip = ops[0].tip
self.tip_length = tip.total_tip_length
x, y, z_top = self._plr_to_machine_coords(ops[0].resource, ops[0].offset)
for o, p in zip(ops, use_channels):
offset = f"{round(o.offset.x, 1)},{round(o.offset.y, 1)},{round(o.offset.z, 1)}"
row = (
f" p{p}: "
f"{o.volume:<{UniLiquidHandlerLaiyuBackend._vol_length}} "
f"{o.resource.name[-20:]:<{UniLiquidHandlerLaiyuBackend._resource_length}} "
f"{offset:<{UniLiquidHandlerLaiyuBackend._offset_length}} "
f"{str(o.flow_rate):<{UniLiquidHandlerLaiyuBackend._flow_rate_length}} "
f"{str(o.blow_out_air_volume):<{UniLiquidHandlerLaiyuBackend._blowout_length}} "
f"{str(o.liquid_height):<{UniLiquidHandlerLaiyuBackend._lld_z_length}} "
# f"{o.liquids if o.liquids is not None else 'none'}"
)
for key, value in backend_kwargs.items():
if isinstance(value, list) and all(isinstance(v, bool) for v in value):
value = "".join("T" if v else "F" for v in value)
if isinstance(value, list):
value = "".join(map(str, value))
row += f" {value:<15}"
# print(row)
coordinate = ops[0].resource.get_absolute_location(x="c",y="c")
offset_xyz = ops[0].offset
x = coordinate.x + offset_xyz.x
y = coordinate.y + offset_xyz.y
z = self.total_height - (coordinate.z + self.tip_length) + offset_xyz.z
# print(x, y, z)
# print("moving")
self._pipette_ctrl._update_tip_status()
if self._pipette_ctrl.tip_status == TipStatus.TIP_ATTACHED:
logger.warning("已有枪头,无需重复拾取")
return
# 判断枪头是否存在
self.hardware_interface._update_tip_status()
if not self.hardware_interface.tip_status == TipStatus.TIP_ATTACHED:
print("无枪头,无法吸液")
return
# 判断吸液量是否超过枪头容量
flow_rate = backend_kwargs["flow_rate"] if "flow_rate" in backend_kwargs else 500
blow_out_air_volume = backend_kwargs["blow_out_air_volume"] if "blow_out_air_volume" in backend_kwargs else 0
if self.hardware_interface.current_volume + ops[0].volume + blow_out_air_volume > self.hardware_interface.max_volume:
self.hardware_interface.logger.error(f"吸液量超过枪头容量: {self.hardware_interface.current_volume + ops[0].volume} > {self.hardware_interface.max_volume}")
return
try:
# 1. 移到枪头正上方
self._xyz.move_to_work_coord_safe(x=x, y=y, z=z_top, speed=200)
# 2. 下压到套枪头深度fitting_depth 是枪头套入长度)
z_pickup = z_top + tip.fitting_depth
self._xyz.move_to_work_coord_safe(z=z_pickup, speed=100)
# 3. 退回安全高度
self._xyz.move_to_work_coord_safe(
z=self._xyz.machine_config.safe_z_height, speed=100
)
except Exception as e:
logger.error(f"pick_up_tips 移动失败: {e}")
raise
# 移动到吸液位置
self.hardware_interface.xyz_controller.move_to_work_coord_safe(x=x, y=-y, z=z,speed=200)
self.pipette_aspirate(volume=ops[0].volume, flow_rate=flow_rate)
# ------------------------------------------------------------------ drop_tips
async def drop_tips(self, ops: List[Drop], use_channels: List[int], **backend_kwargs):
x, y, z = self._plr_to_machine_coords(ops[0].resource, ops[0].offset)
z -= 20 # 额外下移补偿
self.hardware_interface.xyz_controller.move_to_work_coord_safe(z=self.hardware_interface.xyz_controller.machine_config.safe_z_height)
if blow_out_air_volume >0:
self.pipette_aspirate(volume=blow_out_air_volume, flow_rate=flow_rate)
self._pipette_ctrl._update_tip_status()
if self._pipette_ctrl.tip_status == TipStatus.NO_TIP:
logger.warning("无枪头,无需丢弃")
return
try:
self._xyz.move_to_work_coord_safe(x=x, y=y, z=z, speed=200)
self._pipette_ctrl.eject_tip() # 修复: 原来缺少 ()
self._xyz.move_to_work_coord_safe(
z=self._xyz.machine_config.safe_z_height
)
except Exception as e:
logger.error(f"drop_tips 失败: {e}")
raise
# ------------------------------------------------------------------ aspirate
async def aspirate(
self,
ops: List[SingleChannelAspiration],
use_channels: List[int],
**backend_kwargs,
):
x, y, z = self._plr_to_machine_coords(ops[0].resource, ops[0].offset)
async def dispense(
self,
ops: List[SingleChannelDispense],
use_channels: List[int],
**backend_kwargs,
):
# print("Dispensing:")
header = (
f"{'pip#':<{UniLiquidHandlerLaiyuBackend._pip_length}} "
f"{'vol(ul)':<{UniLiquidHandlerLaiyuBackend._vol_length}} "
f"{'resource':<{UniLiquidHandlerLaiyuBackend._resource_length}} "
f"{'offset':<{UniLiquidHandlerLaiyuBackend._offset_length}} "
f"{'flow rate':<{UniLiquidHandlerLaiyuBackend._flow_rate_length}} "
f"{'blowout':<{UniLiquidHandlerLaiyuBackend._blowout_length}} "
f"{'lld_z':<{UniLiquidHandlerLaiyuBackend._lld_z_length}} "
# f"{'liquids':<20}" # TODO: add liquids
)
for key in backend_kwargs:
header += f"{key:<{UniLiquidHandlerLaiyuBackend._kwargs_length}} "[-16:]
# print(header)
self._pipette_ctrl._update_tip_status()
if self._pipette_ctrl.tip_status != TipStatus.TIP_ATTACHED:
raise RuntimeError("无枪头,无法吸液")
for o, p in zip(ops, use_channels):
offset = f"{round(o.offset.x, 1)},{round(o.offset.y, 1)},{round(o.offset.z, 1)}"
row = (
f" p{p}: "
f"{o.volume:<{UniLiquidHandlerLaiyuBackend._vol_length}} "
f"{o.resource.name[-20:]:<{UniLiquidHandlerLaiyuBackend._resource_length}} "
f"{offset:<{UniLiquidHandlerLaiyuBackend._offset_length}} "
f"{str(o.flow_rate):<{UniLiquidHandlerLaiyuBackend._flow_rate_length}} "
f"{str(o.blow_out_air_volume):<{UniLiquidHandlerLaiyuBackend._blowout_length}} "
f"{str(o.liquid_height):<{UniLiquidHandlerLaiyuBackend._lld_z_length}} "
# f"{o.liquids if o.liquids is not None else 'none'}"
)
for key, value in backend_kwargs.items():
if isinstance(value, list) and all(isinstance(v, bool) for v in value):
value = "".join("T" if v else "F" for v in value)
if isinstance(value, list):
value = "".join(map(str, value))
row += f" {value:<{UniLiquidHandlerLaiyuBackend._kwargs_length}}"
# print(row)
coordinate = ops[0].resource.get_absolute_location(x="c",y="c")
offset_xyz = ops[0].offset
x = coordinate.x + offset_xyz.x
y = coordinate.y + offset_xyz.y
z = self.total_height - (coordinate.z + self.tip_length) + offset_xyz.z
# print(x, y, z)
# print("moving")
flow_rate = backend_kwargs.get("flow_rate", 500)
blow_out_air_volume = backend_kwargs.get("blow_out_air_volume", 0)
# 判断枪头是否存在
self.hardware_interface._update_tip_status()
if not self.hardware_interface.tip_status == TipStatus.TIP_ATTACHED:
print("无枪头,无法排液")
return
# 判断排液量是否超过枪头容量
flow_rate = backend_kwargs["flow_rate"] if "flow_rate" in backend_kwargs else 500
blow_out_air_volume = backend_kwargs["blow_out_air_volume"] if "blow_out_air_volume" in backend_kwargs else 0
if self.hardware_interface.current_volume - ops[0].volume - blow_out_air_volume < 0:
self.hardware_interface.logger.error(f"排液量超过枪头容量: {self.hardware_interface.current_volume - ops[0].volume - blow_out_air_volume} < 0")
return
if (
self._pipette_ctrl.current_volume + ops[0].volume + blow_out_air_volume
> self._pipette_ctrl.max_volume
):
raise RuntimeError(
f"吸液量超过枪头容量: "
f"{self._pipette_ctrl.current_volume + ops[0].volume} > {self._pipette_ctrl.max_volume}"
)
# 移动到排液位置
self.hardware_interface.xyz_controller.move_to_work_coord_safe(x=x, y=-y, z=z,speed=200)
self.pipette_dispense(volume=ops[0].volume, flow_rate=flow_rate)
self._xyz.move_to_work_coord_safe(x=x, y=y, z=z, speed=200)
self._pipette_aspirate(volume=ops[0].volume, flow_rate=flow_rate)
self._xyz.move_to_work_coord_safe(
z=self._xyz.machine_config.safe_z_height
)
if blow_out_air_volume > 0:
self._pipette_aspirate(volume=blow_out_air_volume, flow_rate=flow_rate)
self.hardware_interface.xyz_controller.move_to_work_coord_safe(z=self.hardware_interface.xyz_controller.machine_config.safe_z_height)
if blow_out_air_volume > 0:
self.pipette_dispense(volume=blow_out_air_volume, flow_rate=flow_rate)
# self.joint_state_publisher.send_resource_action(ops[0].resource.name, x, y, z, "",channels=use_channels)
# ------------------------------------------------------------------ dispense
async def pick_up_tips96(self, pickup: PickupTipRack, **backend_kwargs):
print(f"Picking up tips from {pickup.resource.name}.")
async def dispense(
self,
ops: List[SingleChannelDispense],
use_channels: List[int],
**backend_kwargs,
):
x, y, z = self._plr_to_machine_coords(ops[0].resource, ops[0].offset)
async def drop_tips96(self, drop: DropTipRack, **backend_kwargs):
print(f"Dropping tips to {drop.resource.name}.")
self._pipette_ctrl._update_tip_status()
if self._pipette_ctrl.tip_status != TipStatus.TIP_ATTACHED:
raise RuntimeError("无枪头,无法排液")
async def aspirate96(
self, aspiration: Union[MultiHeadAspirationPlate, MultiHeadAspirationContainer]
):
if isinstance(aspiration, MultiHeadAspirationPlate):
resource = aspiration.wells[0].parent
else:
resource = aspiration.container
print(f"Aspirating {aspiration.volume} from {resource}.")
flow_rate = backend_kwargs.get("flow_rate", 500)
blow_out_air_volume = backend_kwargs.get("blow_out_air_volume", 0)
async def dispense96(self, dispense: Union[MultiHeadDispensePlate, MultiHeadDispenseContainer]):
if isinstance(dispense, MultiHeadDispensePlate):
resource = dispense.wells[0].parent
else:
resource = dispense.container
print(f"Dispensing {dispense.volume} to {resource}.")
if (
self._pipette_ctrl.current_volume - ops[0].volume - blow_out_air_volume < 0
):
raise RuntimeError(
f"排液量超过当前体积: "
f"{self._pipette_ctrl.current_volume - ops[0].volume - blow_out_air_volume} < 0"
)
async def pick_up_resource(self, pickup: ResourcePickup):
print(f"Picking up resource: {pickup}")
self._xyz.move_to_work_coord_safe(x=x, y=y, z=z, speed=200)
self._pipette_dispense(volume=ops[0].volume, flow_rate=flow_rate)
async def move_picked_up_resource(self, move: ResourceMove):
print(f"Moving picked up resource: {move}")
self._xyz.move_to_work_coord_safe(
z=self._xyz.machine_config.safe_z_height
)
if blow_out_air_volume > 0:
self._pipette_dispense(volume=blow_out_air_volume, flow_rate=flow_rate)
async def drop_resource(self, drop: ResourceDrop):
print(f"Dropping resource: {drop}")
# ------------------------------------------------------------------ 96-channel stubs
def can_pick_up_tip(self, channel_idx: int, tip: Tip) -> bool:
return True
async def pick_up_tips96(self, pickup: PickupTipRack, **backend_kwargs):
logger.info(f"Picking up tips from {pickup.resource.name}.")
async def drop_tips96(self, drop: DropTipRack, **backend_kwargs):
logger.info(f"Dropping tips to {drop.resource.name}.")
async def aspirate96(
self, aspiration: Union[MultiHeadAspirationPlate, MultiHeadAspirationContainer]
):
if isinstance(aspiration, MultiHeadAspirationPlate):
resource = aspiration.wells[0].parent
else:
resource = aspiration.container
logger.info(f"Aspirating {aspiration.volume} from {resource}.")
async def dispense96(
self, dispense: Union[MultiHeadDispensePlate, MultiHeadDispenseContainer]
):
if isinstance(dispense, MultiHeadDispensePlate):
resource = dispense.wells[0].parent
else:
resource = dispense.container
logger.info(f"Dispensing {dispense.volume} to {resource}.")
async def pick_up_resource(self, pickup: ResourcePickup):
logger.info(f"Picking up resource: {pickup}")
async def move_picked_up_resource(self, move: ResourceMove):
logger.info(f"Moving picked up resource: {move}")
async def drop_resource(self, drop: ResourceDrop):
logger.info(f"Dropping resource: {drop}")
def can_pick_up_tip(self, channel_idx: int, tip: Tip) -> bool:
return True

View File

@@ -5,21 +5,16 @@
封装SOPA移液器的高级控制功能
"""
# 添加项目根目录到Python路径以解决模块导入问题
import sys
import os
from tkinter import N
_current_file = os.path.abspath(__file__)
_project_root = os.path.dirname(os.path.dirname(os.path.dirname(os.path.dirname(os.path.dirname(_current_file)))))
if _project_root not in sys.path:
sys.path.insert(0, _project_root)
from unilabos.devices.liquid_handling.laiyu.drivers.xyz_stepper_driver import ModbusException
# 无论如何都添加项目根目录到路径
current_file = os.path.abspath(__file__)
# 从 .../Uni-Lab-OS/unilabos/devices/LaiYu_Liquid/controllers/pipette_controller.py
# 向上5级到 .../Uni-Lab-OS
project_root = os.path.dirname(os.path.dirname(os.path.dirname(os.path.dirname(os.path.dirname(current_file)))))
# 强制添加项目根目录到sys.path的开头
sys.path.insert(0, project_root)
import time
import logging
from typing import Optional, List, Dict, Tuple
@@ -153,7 +148,7 @@ class PipetteController:
logger.error("移液器连接失败")
return False
logger.info("移液器连接成功")
# 连接XYZ步进电机控制器如果提供了端口
if self.xyz_port != self.pipette_port:
try:
@@ -172,24 +167,62 @@ class PipetteController:
try:
self.xyz_controller = XYZController(self.xyz_port, auto_connect=False)
self.xyz_controller.serial_conn = self.pipette.serial_port
self.xyz_controller.serial_lock = self.pipette.lock
self.xyz_controller.is_connected = True
logger.info("XYZ控制器与移液器共享串口和互斥锁")
except Exception as e:
logger.info("未配置XYZ步进电机端口跳过运动控制器连接")
logger.warning(f"共享端口 XYZ 控制器创建失败: {e}")
self.xyz_controller = None
self.xyz_connected = False
return True
except Exception as e:
logger.error(f"设备连接失败: {e}")
return False
def connect_shared(self, serial_conn, serial_lock, xyz_controller: XYZController) -> bool:
"""使用已连接的串口和XYZ控制器路径 B 模式XYZ 先开串口,移液器共享)
Args:
serial_conn: 已打开的串口连接(来自 XYZController
serial_lock: 串口互斥锁(来自 XYZController
xyz_controller: 已连接的 XYZController 实例
"""
try:
self.pipette.serial_port = serial_conn
self.pipette.lock = serial_lock
self.pipette.is_connected = True
self.xyz_controller = xyz_controller
self.xyz_connected = True
logger.info("移液控制器已通过 connect_shared 共享 XYZ 串口")
return True
except Exception as e:
logger.error(f"connect_shared 失败: {e}")
return False
def disconnect_shared(self) -> None:
"""释放共享串口引用(与 connect_shared 对称)。
注意:不关闭串口本身,串口由 XYZController 负责关闭。
"""
try:
self.pipette.serial_port = None
self.pipette.lock = None
self.pipette.is_connected = False
self.xyz_controller = None
self.xyz_connected = False
logger.info("移液控制器已释放共享串口引用")
except Exception as e:
logger.error(f"disconnect_shared 失败: {e}")
def initialize(self) -> bool:
"""初始化移液器"""
try:
if self.pipette.initialize():
logger.info("移液器初始化成功")
# 检查枪头状态
self._update_tip_status()
self.xyz_controller.home_all_axes()
self.xyz_controller.move_to_work_coord_safe(x=0, y=-150, z=0)
return True
return False
except Exception as e:
@@ -198,56 +231,58 @@ class PipetteController:
def disconnect(self):
"""断开连接"""
# 断开移液器连接
if self.xyz_controller and self.xyz_connected:
if self.xyz_port != self.pipette_port:
try:
self.xyz_controller.disconnect()
logger.info("XYZ 步进电机已断开")
except Exception as e:
logger.error(f"断开 XYZ 步进电机失败: {e}")
else:
self.xyz_controller.serial_conn = None
self.xyz_connected = False
self.xyz_controller = None
self.pipette.disconnect()
logger.info("移液器已断开")
# 断开 XYZ 步进电机连接
if self.xyz_controller and self.xyz_connected:
try:
self.xyz_controller.disconnect()
self.xyz_connected = False
logger.info("XYZ 步进电机已断开")
except Exception as e:
logger.error(f"断开 XYZ 步进电机失败: {e}")
def _check_xyz_safety(self, axis: MotorAxis, target_position: int) -> bool:
"""
检查 XYZ 轴移动的安全性
Args:
axis: 电机轴
target_position: 目标位置(步数)
Returns:
是否安全
"""
try:
# 获取当前电机状态
motor_position = self.xyz_controller.get_motor_status(axis)
# 检查电机状态是否正常 (不是碰撞停止或限位停止)
if motor_position.status in [MotorStatus.COLLISION_STOP,
MotorStatus.FORWARD_LIMIT_STOP,
if motor_position.status in [MotorStatus.COLLISION_STOP,
MotorStatus.FORWARD_LIMIT_STOP,
MotorStatus.REVERSE_LIMIT_STOP]:
logger.error(f"{axis.name} 轴电机处于错误状态: {motor_position.status.name}")
return False
# 检查位置限制 (扩大安全范围以适应实际硬件)
# 步进电机的位置范围通常很大,这里设置更合理的范围
if target_position < -500000 or target_position > 500000:
logger.error(f"{axis.name} 轴目标位置超出安全范围: {target_position}")
return False
# 检查移动距离是否过大 (单次移动不超过 20000 步约12mm)
current_position = motor_position.steps
move_distance = abs(target_position - current_position)
if move_distance > 20000:
logger.error(f"{axis.name} 轴单次移动距离过大: {move_distance}")
return False
return True
except Exception as e:
logger.error(f"安全检查失败: {e}")
return False
@@ -255,48 +290,48 @@ class PipetteController:
def move_z_relative(self, distance_mm: float, speed: int = 2000, acceleration: int = 500) -> bool:
"""
Z轴相对移动
Args:
distance_mm: 移动距离(mm),正值向下,负值向上
speed: 移动速度(rpm)
acceleration: 加速度(rpm/s)
Returns:
移动是否成功
"""
if not self.xyz_controller or not self.xyz_connected:
logger.error("XYZ 步进电机未连接,无法执行移动")
return False
try:
# 参数验证
if abs(distance_mm) > 15.0:
logger.error(f"移动距离过大: {distance_mm}mm最大允许15mm")
return False
if speed < 100 or speed > 5000:
logger.error(f"速度参数无效: {speed}rpm范围应为100-5000")
return False
# 获取当前 Z 轴位置
current_status = self.xyz_controller.get_motor_status(MotorAxis.Z)
current_z_position = current_status.steps
# 计算移动距离对应的步数 (1mm = 1638.4步)
mm_to_steps = 1638.4
move_distance_steps = int(distance_mm * mm_to_steps)
# 计算目标位置
target_z_position = current_z_position + move_distance_steps
# 安全检查
if not self._check_xyz_safety(MotorAxis.Z, target_z_position):
logger.error("Z轴移动安全检查失败")
return False
logger.info(f"Z轴相对移动: {distance_mm}mm ({move_distance_steps}步)")
logger.info(f"当前位置: {current_z_position}步 -> 目标位置: {target_z_position}")
# 执行移动
success = self.xyz_controller.move_to_position(
axis=MotorAxis.Z,
@@ -305,28 +340,28 @@ class PipetteController:
acceleration=acceleration,
precision=50
)
if not success:
logger.error("Z轴移动命令发送失败")
return False
# 等待移动完成
if not self.xyz_controller.wait_for_completion(MotorAxis.Z, timeout=10.0):
logger.error("Z轴移动超时")
return False
# 验证移动结果
final_status = self.xyz_controller.get_motor_status(MotorAxis.Z)
final_position = final_status.steps
position_error = abs(final_position - target_z_position)
logger.info(f"Z轴移动完成最终位置: {final_position}步,误差: {position_error}")
if position_error > 100:
logger.warning(f"Z轴位置误差较大: {position_error}")
return True
except ModbusException as e:
logger.error(f"Modbus通信错误: {e}")
return False
@@ -337,21 +372,20 @@ class PipetteController:
def emergency_stop(self) -> bool:
"""
紧急停止所有运动
Returns:
停止是否成功
"""
success = True
# 停止移液器操作
try:
if self.pipette and self.connected:
# 这里可以添加移液器的紧急停止逻辑
if self.pipette and self.pipette.is_connected:
self.pipette.emergency_stop()
logger.info("移液器紧急停止")
except Exception as e:
logger.error(f"移液器紧急停止失败: {e}")
success = False
# 停止 XYZ 轴运动
try:
if self.xyz_controller and self.xyz_connected:
@@ -360,7 +394,7 @@ class PipetteController:
except Exception as e:
logger.error(f"XYZ 轴紧急停止失败: {e}")
success = False
return success
def pickup_tip(self) -> bool:
@@ -376,7 +410,7 @@ class PipetteController:
return True
logger.info("开始装载枪头 - Z轴向下移动10mm")
# 使用相对移动方法向下移动10mm
if self.move_z_relative(distance_mm=10.0, speed=2000, acceleration=500):
# 更新枪头状态
@@ -688,31 +722,31 @@ class PipetteController:
if __name__ == "__main__":
# 配置日志
import logging
# 设置日志级别
logging.basicConfig(
level=logging.INFO,
format='%(asctime)s - %(name)s - %(levelname)s - %(message)s'
)
def interactive_test():
"""交互式测试模式 - 适用于已连接的设备"""
print("\n" + "=" * 60)
print("🧪 移液器交互式测试模式")
print("=" * 60)
# 获取用户输入的连接参数
print("\n📡 设备连接配置:")
port = input("请输入移液器串口端口 (默认: /dev/ttyUSB_CH340): ").strip() or "/dev/ttyUSB_CH340"
address_input = input("请输入移液器设备地址 (默认: 4): ").strip()
address = int(address_input) if address_input else 4
# 询问是否连接 XYZ 步进电机控制器
xyz_enable = input("是否连接 XYZ 步进电机控制器? (y/N): ").strip().lower()
xyz_port = None
if xyz_enable not in ['n', 'no']:
xyz_port = input("请输入 XYZ 控制器串口端口 (默认: /dev/ttyUSB_CH340): ").strip() or "/dev/ttyUSB_CH340"
try:
# 创建移液控制器实例
if xyz_port:
@@ -721,21 +755,21 @@ if __name__ == "__main__":
else:
print(f"\n🔧 创建移液控制器实例 (端口: {port}, 地址: {address})...")
pipette = PipetteController(port=port, address=address)
# 连接设备
print("\n📞 连接移液器设备...")
if not pipette.connect():
print("❌ 设备连接失败,请检查连接")
return
print("✅ 设备连接成功")
# 初始化设备
print("\n🚀 初始化设备...")
if not pipette.initialize():
print("❌ 设备初始化失败")
return
print("✅ 设备初始化成功")
# 交互式菜单
while True:
print("\n" + "=" * 50)
@@ -755,9 +789,9 @@ if __name__ == "__main__":
print("99. 🚨 紧急停止")
print("0. 🚪 退出程序")
print("=" * 50)
choice = input("\n请选择操作 (0-12, 99): ").strip()
if choice == "0":
print("\n👋 退出程序...")
break
@@ -773,7 +807,7 @@ if __name__ == "__main__":
# print(f" 🔧 枪头使用次数: {status['statistics']['tip_count']}")
print(f" ⬆️ 吸液次数: {status['statistics']['aspirate_count']}")
print(f" ⬇️ 排液次数: {status['statistics']['dispense_count']}")
elif choice == "2":
# 装载枪头
print("\n🔧 装载枪头...")
@@ -781,14 +815,14 @@ if __name__ == "__main__":
print("📍 使用 XYZ 控制器进行 Z 轴定位 (下移 10mm)")
else:
print("⚠️ 未连接 XYZ 控制器,仅执行移液器枪头装载")
if pipette.pickup_tip():
print("✅ 枪头装载成功")
if pipette.xyz_connected:
print("📍 Z 轴已移动到装载位置")
else:
print("❌ 枪头装载失败")
elif choice == "3":
# 弹出枪头
print("\n🗑️ 弹出枪头...")
@@ -796,7 +830,7 @@ if __name__ == "__main__":
print("✅ 枪头弹出成功")
else:
print("❌ 枪头弹出失败")
elif choice == "4":
# 吸液操作
try:
@@ -810,7 +844,7 @@ if __name__ == "__main__":
print("❌ 吸液失败")
except ValueError:
print("❌ 请输入有效的数字")
elif choice == "5":
# 排液操作
try:
@@ -824,7 +858,7 @@ if __name__ == "__main__":
print("❌ 排液失败")
except ValueError:
print("❌ 请输入有效的数字")
elif choice == "6":
# 混合操作
try:
@@ -838,7 +872,7 @@ if __name__ == "__main__":
print("❌ 混合失败")
except ValueError:
print("❌ 请输入有效的数字")
elif choice == "7":
# 液体转移
try:
@@ -846,7 +880,7 @@ if __name__ == "__main__":
source = input("源孔位 (可选, 如A1): ").strip() or None
dest = input("目标孔位 (可选, 如B1): ").strip() or None
new_tip = input("是否使用新枪头? (y/n, 默认y): ").strip().lower() != 'n'
print(f"\n🔄 执行液体转移 ({volume}ul)...")
if pipette.transfer(volume=volume, source_well=source, dest_well=dest, new_tip=new_tip):
print("✅ 液体转移完成")
@@ -854,7 +888,7 @@ if __name__ == "__main__":
print("❌ 液体转移失败")
except ValueError:
print("❌ 请输入有效的数字")
elif choice == "8":
# 设置液体类型
print("\n🧪 可用液体类型:")
@@ -864,16 +898,16 @@ if __name__ == "__main__":
"3": (LiquidClass.VISCOUS, "粘稠液体"),
"4": (LiquidClass.VOLATILE, "挥发性液体")
}
for key, (liquid_class, description) in liquid_options.items():
print(f" {key}. {description}")
liquid_choice = input("请选择液体类型 (1-4): ").strip()
if liquid_choice in liquid_options:
liquid_class, description = liquid_options[liquid_choice]
pipette.set_liquid_class(liquid_class)
print(f"✅ 液体类型设置为: {description}")
# 显示参数
params = pipette.liquid_params
print(f"📋 参数设置:")
@@ -883,7 +917,7 @@ if __name__ == "__main__":
print(f" 💧 预润湿: {'' if params.pre_wet else ''}")
else:
print("❌ 无效选择")
elif choice == "9":
# 自定义参数
try:
@@ -892,19 +926,19 @@ if __name__ == "__main__":
dispense_speed = input("排液速度 (默认800): ").strip()
air_gap = input("空气间隙 (ul, 默认10.0): ").strip()
pre_wet = input("预润湿 (y/n, 默认n): ").strip().lower() == 'y'
custom_params = LiquidParameters(
aspirate_speed=int(aspirate_speed) if aspirate_speed else 500,
dispense_speed=int(dispense_speed) if dispense_speed else 800,
air_gap=float(air_gap) if air_gap else 10.0,
pre_wet=pre_wet
)
pipette.set_custom_parameters(custom_params)
print("✅ 自定义参数设置完成")
except ValueError:
print("❌ 请输入有效的数字")
elif choice == "10":
# 校准体积
try:
@@ -914,12 +948,12 @@ if __name__ == "__main__":
print(f"✅ 校准完成,校准系数: {actual/expected:.3f}")
except ValueError:
print("❌ 请输入有效的数字")
elif choice == "11":
# 重置统计
pipette.reset_statistics()
print("✅ 统计信息已重置")
elif choice == "12":
# 液体类型测试
print("\n🧪 液体类型参数对比:")
@@ -929,7 +963,7 @@ if __name__ == "__main__":
(LiquidClass.VISCOUS, "粘稠液体"),
(LiquidClass.VOLATILE, "挥发性液体")
]
for liquid_class, description in liquid_tests:
params = pipette.LIQUID_PARAMS[liquid_class]
print(f"\n📋 {description} ({liquid_class.value}):")
@@ -938,7 +972,7 @@ if __name__ == "__main__":
print(f" 💨 空气间隙: {params.air_gap}ul")
print(f" 💧 预润湿: {'' if params.pre_wet else ''}")
print(f" ⏱️ 吸液后延时: {params.delay_after_aspirate}s")
elif choice == "99":
# 紧急停止
print("\n🚨 执行紧急停止...")
@@ -949,19 +983,19 @@ if __name__ == "__main__":
else:
print("❌ 紧急停止执行失败")
print("⚠️ 请手动检查设备状态并采取必要措施")
# 紧急停止后询问是否继续
continue_choice = input("\n是否继续操作?(y/n): ").strip().lower()
if continue_choice != 'y':
print("🚪 退出程序")
break
else:
print("❌ 无效选择,请重新输入")
# 等待用户确认继续
input("\n按回车键继续...")
except KeyboardInterrupt:
print("\n\n⚠️ 用户中断操作")
except Exception as e:
@@ -974,19 +1008,19 @@ if __name__ == "__main__":
print("✅ 连接已断开")
except:
print("⚠️ 断开连接时出现问题")
def demo_test():
"""演示测试模式 - 完整功能演示"""
print("\n" + "=" * 60)
print("🎬 移液控制器演示测试")
print("=" * 60)
try:
# 创建移液控制器实例
print("1. 🔧 创建移液控制器实例...")
pipette = PipetteController(port="/dev/ttyUSB0", address=4)
print("✅ 移液控制器实例创建成功")
# 连接设备
print("\n2. 📞 连接移液器设备...")
if pipette.connect():
@@ -994,7 +1028,7 @@ if __name__ == "__main__":
else:
print("❌ 设备连接失败")
return False
# 初始化设备
print("\n3. 🚀 初始化设备...")
if pipette.initialize():
@@ -1002,19 +1036,19 @@ if __name__ == "__main__":
else:
print("❌ 设备初始化失败")
return False
# 装载枪头
print("\n4. 🔧 装载枪头...")
if pipette.pickup_tip():
print("✅ 枪头装载成功")
else:
print("❌ 枪头装载失败")
# 设置液体类型
print("\n5. 🧪 设置液体类型为血清...")
pipette.set_liquid_class(LiquidClass.SERUM)
print("✅ 液体类型设置完成")
# 吸液操作
print("\n6. 💧 执行吸液操作...")
volume_to_aspirate = 100.0
@@ -1023,7 +1057,7 @@ if __name__ == "__main__":
print(f"📊 当前体积: {pipette.current_volume}ul")
else:
print("❌ 吸液失败")
# 排液操作
print("\n7. 💦 执行排液操作...")
volume_to_dispense = 50.0
@@ -1032,14 +1066,14 @@ if __name__ == "__main__":
print(f"📊 剩余体积: {pipette.current_volume}ul")
else:
print("❌ 排液失败")
# 混合操作
print("\n8. 🌀 执行混合操作...")
if pipette.mix(cycles=3, volume=30.0):
print("✅ 混合完成")
else:
print("❌ 混合失败")
# 获取状态信息
print("\n9. 📊 获取设备状态...")
status = pipette.get_status()
@@ -1052,30 +1086,30 @@ if __name__ == "__main__":
# print(f" 🔧 枪头使用次数: {status['statistics']['tip_count']}")
print(f" ⬆️ 吸液次数: {status['statistics']['aspirate_count']}")
print(f" ⬇️ 排液次数: {status['statistics']['dispense_count']}")
# 弹出枪头
print("\n10. 🗑️ 弹出枪头...")
if pipette.eject_tip():
print("✅ 枪头弹出成功")
else:
print("❌ 枪头弹出失败")
print("\n" + "=" * 60)
print("✅ 移液控制器演示测试完成")
print("=" * 60)
return True
except Exception as e:
print(f"\n❌ 测试过程中发生异常: {e}")
return False
finally:
# 断开连接
print("\n📞 断开连接...")
pipette.disconnect()
print("✅ 连接已断开")
# 主程序入口
print("🧪 移液器控制器测试程序")
print("=" * 40)
@@ -1083,9 +1117,9 @@ if __name__ == "__main__":
print("2. 🎬 演示测试")
print("0. 🚪 退出")
print("=" * 40)
mode = input("请选择测试模式 (0-2): ").strip()
if mode == "1":
interactive_test()
elif mode == "2":
@@ -1094,7 +1128,7 @@ if __name__ == "__main__":
print("👋 再见!")
else:
print("❌ 无效选择")
print("\n🎉 程序结束!")
print("\n💡 使用说明:")
print("1. 确保移液器硬件已正确连接")

View File

@@ -13,7 +13,7 @@ from pylabrobot.liquid_handling import (
SingleChannelDispense,
PickupTipRack,
DropTipRack,
MultiHeadAspirationPlate, ChatterBoxBackend, LiquidHandlerChatterboxBackend,
MultiHeadAspirationPlate,
)
from pylabrobot.liquid_handling.standard import (
MultiHeadAspirationContainer,
@@ -41,12 +41,6 @@ class TransformXYZDeck(Deck):
super().__init__(name, size_x, size_y, size_z)
self.name = name
class TransformXYZBackend(LiquidHandlerBackend):
def __init__(self, name: str, host: str, port: int, timeout: float):
super().__init__()
self.host = host
self.port = port
self.timeout = timeout
class TransformXYZRvizBackend(UniLiquidHandlerRvizBackend):
def __init__(self, name: str, channel_num: int):
@@ -86,7 +80,9 @@ class TransformXYZContainer(Plate, TipRack):
class TransformXYZHandler(LiquidHandlerAbstract):
support_touch_tip = False
def __init__(self, deck: Deck, host: str = "127.0.0.1", port: int = 9999, timeout: float = 10.0, channel_num=1, simulator=True, **backend_kwargs):
def __init__(self, deck: Deck, host: str = "127.0.0.1", port: int = 9999, timeout: float = 10.0, channel_num=1, simulator=True,
serial_port: str = "/dev/ttyUSB0", baudrate: int = 115200, pipette_address: int = 4,
total_height: float = 310, **backend_kwargs):
# Handle case where deck is passed as a dict (from serialization)
if isinstance(deck, dict):
# Try to create a TransformXYZDeck from the dict
@@ -102,11 +98,22 @@ class TransformXYZHandler(LiquidHandlerAbstract):
deck = TransformXYZDeck(name='deck', size_x=100, size_y=100, size_z=100)
if simulator:
self._unilabos_backend = TransformXYZRvizBackend(name="laiyu",channel_num=channel_num)
self._unilabos_backend = TransformXYZRvizBackend(name="laiyu", channel_num=channel_num)
else:
self._unilabos_backend = TransformXYZBackend(name="laiyu",host=host, port=port, timeout=timeout)
self._unilabos_backend = UniLiquidHandlerLaiyuBackend(
num_channels=channel_num,
total_height=total_height,
port=serial_port,
baudrate=baudrate,
pipette_address=pipette_address,
)
super().__init__(backend=self._unilabos_backend, deck=deck, simulator=simulator, channel_num=channel_num)
def post_init(self, ros_node):
super().post_init(ros_node)
if hasattr(self._unilabos_backend, 'post_init'):
self._unilabos_backend.post_init(ros_node)
async def add_liquid(
self,
asp_vols: Union[List[float], float],
@@ -128,7 +135,25 @@ class TransformXYZHandler(LiquidHandlerAbstract):
mix_liquid_height: Optional[float] = None,
none_keys: List[str] = [],
):
pass
return await super().add_liquid(
asp_vols=asp_vols,
dis_vols=dis_vols,
reagent_sources=reagent_sources,
targets=targets,
use_channels=use_channels,
flow_rates=flow_rates,
offsets=offsets,
liquid_height=liquid_height,
blow_out_air_volume=blow_out_air_volume,
spread=spread,
is_96_well=is_96_well,
delays=delays,
mix_time=mix_time,
mix_vol=mix_vol,
mix_rate=mix_rate,
mix_liquid_height=mix_liquid_height,
none_keys=none_keys,
)
async def aspirate(
self,
@@ -142,7 +167,17 @@ class TransformXYZHandler(LiquidHandlerAbstract):
spread: Literal["wide", "tight", "custom"] = "wide",
**backend_kwargs,
):
pass
return await super().aspirate(
resources=resources,
vols=vols,
use_channels=use_channels,
flow_rates=flow_rates,
offsets=offsets,
liquid_height=liquid_height,
blow_out_air_volume=blow_out_air_volume,
spread=spread,
**backend_kwargs,
)
async def dispense(
self,
@@ -156,7 +191,17 @@ class TransformXYZHandler(LiquidHandlerAbstract):
spread: Literal["wide", "tight", "custom"] = "wide",
**backend_kwargs,
):
pass
return await super().dispense(
resources=resources,
vols=vols,
use_channels=use_channels,
flow_rates=flow_rates,
offsets=offsets,
liquid_height=liquid_height,
blow_out_air_volume=blow_out_air_volume,
spread=spread,
**backend_kwargs,
)
async def drop_tips(
self,
@@ -166,7 +211,13 @@ class TransformXYZHandler(LiquidHandlerAbstract):
allow_nonzero_volume: bool = False,
**backend_kwargs,
):
pass
return await super().drop_tips(
tip_spots=tip_spots,
use_channels=use_channels,
offsets=offsets,
allow_nonzero_volume=allow_nonzero_volume,
**backend_kwargs,
)
async def mix(
self,
@@ -178,7 +229,15 @@ class TransformXYZHandler(LiquidHandlerAbstract):
mix_rate: Optional[float] = None,
none_keys: List[str] = [],
):
pass
return await super().mix(
targets=targets,
mix_time=mix_time,
mix_vol=mix_vol,
height_to_bottom=height_to_bottom,
offsets=offsets,
mix_rate=mix_rate,
none_keys=none_keys,
)
async def pick_up_tips(
self,
@@ -187,7 +246,12 @@ class TransformXYZHandler(LiquidHandlerAbstract):
offsets: Optional[List[Coordinate]] = None,
**backend_kwargs,
):
pass
return await super().pick_up_tips(
tip_spots=tip_spots,
use_channels=use_channels,
offsets=offsets,
**backend_kwargs,
)
async def transfer_liquid(
self,
@@ -214,5 +278,26 @@ class TransformXYZHandler(LiquidHandlerAbstract):
delays: Optional[List[int]] = None,
none_keys: List[str] = [],
):
pass
return await super().transfer_liquid(
sources=sources,
targets=targets,
tip_racks=tip_racks,
use_channels=use_channels,
asp_vols=asp_vols,
dis_vols=dis_vols,
asp_flow_rates=asp_flow_rates,
dis_flow_rates=dis_flow_rates,
offsets=offsets,
touch_tip=touch_tip,
liquid_height=liquid_height,
blow_out_air_volume=blow_out_air_volume,
spread=spread,
is_96_well=is_96_well,
mix_stage=mix_stage,
mix_times=mix_times,
mix_vol=mix_vol,
mix_rate=mix_rate,
mix_liquid_height=mix_liquid_height,
delays=delays,
none_keys=none_keys,
)

View File

@@ -57,6 +57,18 @@ class TransferLiquidReturn(TypedDict):
targets: List[List[ResourceDict]]
class SetLiquidReturn(TypedDict):
wells: list
volumes: list
class SetLiquidFromPlateReturn(TypedDict):
plate: list
wells: list
volumes: list
class LiquidHandlerMiddleware(LiquidHandler):
def __init__(
self, backend: LiquidHandlerBackend, deck: Deck, simulator: bool = False, channel_num: int = 8, **kwargs

View File

@@ -0,0 +1,376 @@
# -*- coding: utf-8 -*-
"""
ZDT X42 Closed-Loop Stepper Motor Driver
RS485 Serial Communication via USB-Serial Converter
- Baudrate: 115200
"""
import serial
import time
import threading
import struct
import logging
from typing import Optional, Any
try:
from unilabos.device_comms.universal_driver import UniversalDriver
except ImportError:
class UniversalDriver:
def __init__(self, *args, **kwargs):
self.logger = logging.getLogger(self.__class__.__name__)
def execute_command_from_outer(self, command: Any): pass
from serial.rs485 import RS485Settings
class ZDTX42Driver(UniversalDriver):
"""
ZDT X42 闭环步进电机驱动器
支持功能:
- 速度模式运行
- 位置模式运行 (相对/绝对)
- 位置读取和清零
- 使能/禁用控制
通信协议:
- 帧格式: [设备ID] [功能码] [数据...] [校验位=0x6B]
- 响应长度根据功能码决定
"""
def __init__(
self,
port: str,
baudrate: int = 115200,
device_id: int = 1,
timeout: float = 0.5,
debug: bool = False
):
"""
初始化 ZDT X42 电机驱动
Args:
port: 串口设备路径
baudrate: 波特率 (默认 115200)
device_id: 设备地址 (1-255)
timeout: 通信超时时间(秒)
debug: 是否启用调试输出
"""
super().__init__()
self.id = device_id
self.debug = debug
self.lock = threading.RLock()
self.status = "idle" # 对应注册表中的 status (str)
self.position = 0 # 对应注册表中的 position (int)
try:
self.ser = serial.Serial(
port=port,
baudrate=baudrate,
timeout=timeout,
bytesize=serial.EIGHTBITS,
parity=serial.PARITY_NONE,
stopbits=serial.STOPBITS_ONE
)
# 启用 RS485 模式
try:
self.ser.rs485_mode = RS485Settings(
rts_level_for_tx=True,
rts_level_for_rx=False
)
except Exception:
pass # RS485 模式是可选的
self.logger.info(
f"ZDT X42 Motor connected: {port} "
f"(Baud: {baudrate}, ID: {device_id})"
)
# 自动使能电机,确保初始状态可运动
self.enable(True)
# 启动背景轮询线程,确保 position 实时刷新
self._stop_event = threading.Event()
self._polling_thread = threading.Thread(
target=self._update_loop,
name=f"ZDTPolling_{port}",
daemon=True
)
self._polling_thread.start()
except Exception as e:
self.logger.error(f"Failed to open serial port {port}: {e}")
self.ser = None
def _update_loop(self):
"""背景循环读取电机位置"""
while not self._stop_event.is_set():
try:
self.get_position()
except Exception as e:
if self.debug:
self.logger.error(f"Polling error: {e}")
time.sleep(1.0) # 每1秒刷新一次位置数据
def _send(self, func_code: int, payload: list) -> bytes:
"""
发送指令并接收响应
Args:
func_code: 功能码
payload: 数据负载 (list of bytes)
Returns:
响应数据 (bytes)
"""
if not self.ser:
self.logger.error("Serial port not available")
return b""
with self.lock:
# 清空输入缓冲区
self.ser.reset_input_buffer()
# 构建消息: [ID] [功能码] [数据...] [校验位=0x6B]
message = bytes([self.id, func_code] + payload + [0x6B])
# 发送
self.ser.write(message)
# 根据功能码决定响应长度
# 查询类指令返回 10 字节,控制类指令返回 4 字节
read_len = 10 if func_code in [0x31, 0x32, 0x35, 0x24, 0x27] else 4
response = self.ser.read(read_len)
# 调试输出
if self.debug:
sent_hex = message.hex().upper()
recv_hex = response.hex().upper() if response else 'TIMEOUT'
print(f"[ID {self.id}] TX: {sent_hex} → RX: {recv_hex}")
return response
def enable(self, on: bool = True) -> bool:
"""
使能/禁用电机
Args:
on: True=使能(锁轴), False=禁用(松轴)
Returns:
是否成功
"""
state = 1 if on else 0
resp = self._send(0xF3, [0xAB, state, 0])
return len(resp) >= 4
def move_speed(
self,
speed_rpm: int,
direction: str = "CW",
acceleration: int = 10
) -> bool:
"""
速度模式运行
Args:
speed_rpm: 转速 (RPM)
direction: 方向 ("CW"=顺时针, "CCW"=逆时针)
acceleration: 加速度 (0-255)
Returns:
是否成功
"""
dir_val = 0 if direction.upper() in ["CW", "顺时针"] else 1
speed_bytes = struct.pack('>H', int(speed_rpm))
self.status = f"moving@{speed_rpm}rpm"
resp = self._send(0xF6, [dir_val, speed_bytes[0], speed_bytes[1], acceleration, 0])
return len(resp) >= 4
def move_position(
self,
pulses: int,
speed_rpm: int,
direction: str = "CW",
acceleration: int = 10,
absolute: bool = False
) -> bool:
"""
位置模式运行
Args:
pulses: 脉冲数
speed_rpm: 转速 (RPM)
direction: 方向 ("CW"=顺时针, "CCW"=逆时针)
acceleration: 加速度 (0-255)
absolute: True=绝对位置, False=相对位置
Returns:
是否成功
"""
dir_val = 0 if direction.upper() in ["CW", "顺时针"] else 1
speed_bytes = struct.pack('>H', int(speed_rpm))
self.status = f"moving_to_{pulses}"
pulse_bytes = struct.pack('>I', int(pulses))
abs_flag = 1 if absolute else 0
payload = [
dir_val,
speed_bytes[0], speed_bytes[1],
acceleration,
pulse_bytes[0], pulse_bytes[1], pulse_bytes[2], pulse_bytes[3],
abs_flag,
0
]
resp = self._send(0xFD, payload)
return len(resp) >= 4
def stop(self) -> bool:
"""
停止电机
Returns:
是否成功
"""
self.status = "idle"
resp = self._send(0xFE, [0x98, 0])
return len(resp) >= 4
def rotate_quarter(self, speed_rpm: int = 60, direction: str = "CW") -> bool:
"""
电机旋转 1/4 圈 (阻塞式)
假设电机细分为 3200 脉冲/圈1/4 圈 = 800 脉冲
"""
pulses = 800
success = self.move_position(pulses=pulses, speed_rpm=speed_rpm, direction=direction, absolute=False)
if success:
# 计算预估旋转时间并进行阻塞等待 (Time = revolutions / (RPM/60))
# 1/4 rev / (RPM/60) = 15.0 / RPM
estimated_time = 15.0 / max(1, speed_rpm)
time.sleep(estimated_time + 0.5) # 额外给 0.5 秒缓冲
self.status = "idle"
return success
def wait_time(self, duration_s: float) -> bool:
"""
等待指定时间 (秒)
"""
self.logger.info(f"Waiting for {duration_s} seconds...")
time.sleep(duration_s)
return True
def set_zero(self) -> bool:
"""
清零当前位置
Returns:
是否成功
"""
resp = self._send(0x0A, [])
return len(resp) >= 4
def get_position(self) -> Optional[int]:
"""
读取当前位置 (脉冲数)
Returns:
当前位置脉冲数,失败返回 None
"""
resp = self._send(0x32, [])
if len(resp) >= 8:
# 响应格式: [ID] [Func] [符号位] [数值4字节] [校验]
sign = resp[2] # 0=正, 1=负
value = struct.unpack('>I', resp[3:7])[0]
self.position = -value if sign == 1 else value
if self.debug:
print(f"[Position] Raw: {resp.hex().upper()}, Parsed: {self.position}")
return self.position
self.logger.warning("Failed to read position")
return None
def close(self):
"""关闭串口连接并停止线程"""
if hasattr(self, '_stop_event'):
self._stop_event.set()
if self.ser and self.ser.is_open:
self.ser.close()
self.logger.info("Serial port closed")
# ============================================================
# 测试和调试代码
# ============================================================
def test_motor():
"""基础功能测试"""
logging.basicConfig(level=logging.INFO)
print("="*60)
print("ZDT X42 电机驱动测试")
print("="*60)
driver = ZDTX42Driver(
port="/dev/tty.usbserial-3110",
baudrate=115200,
device_id=2,
debug=True
)
if not driver.ser:
print("❌ 串口打开失败")
return
try:
# 测试 1: 读取位置
print("\n[1] 读取当前位置")
pos = driver.get_position()
print(f"✓ 当前位置: {pos} 脉冲")
# 测试 2: 使能
print("\n[2] 使能电机")
driver.enable(True)
time.sleep(0.3)
print("✓ 电机已锁定")
# 测试 3: 相对位置运动
print("\n[3] 相对位置运动 (1000脉冲)")
driver.move_position(pulses=1000, speed_rpm=60, direction="CW")
time.sleep(2)
pos = driver.get_position()
print(f"✓ 新位置: {pos}")
# 测试 4: 速度运动
print("\n[4] 速度模式 (30RPM, 3秒)")
driver.move_speed(speed_rpm=30, direction="CW")
time.sleep(3)
driver.stop()
pos = driver.get_position()
print(f"✓ 停止后位置: {pos}")
# 测试 5: 禁用
print("\n[5] 禁用电机")
driver.enable(False)
print("✓ 电机已松开")
print("\n" + "="*60)
print("✅ 测试完成")
print("="*60)
except Exception as e:
print(f"\n❌ 测试失败: {e}")
import traceback
traceback.print_exc()
finally:
driver.close()
if __name__ == "__main__":
test_motor()

View File

@@ -623,6 +623,119 @@ class ChinweDevice(UniversalDriver):
time.sleep(duration)
return True
def separation_step(self, motor_id: int = 5, speed: int = 60, pulses: int = 700,
max_cycles: int = 0, timeout: int = 300) -> bool:
"""
分液步骤 - 液位传感器与电机联动
当液位传感器检测到"有液"时,电机顺时针旋转指定脉冲数
当液位传感器检测到"无液"时,电机逆时针旋转指定脉冲数
:param motor_id: 电机ID (必须在初始化时配置的motor_ids中)
:param speed: 电机转速 (RPM)
:param pulses: 每次旋转的脉冲数 (默认700约为1/4圈,假设3200脉冲/圈)
:param max_cycles: 最大执行循环次数 (0=无限制,默认0)
:param timeout: 整体超时时间 (秒)
:return: 成功返回True,超时或失败返回False
"""
motor_id = int(motor_id)
speed = int(speed)
pulses = int(pulses)
max_cycles = int(max_cycles)
timeout = int(timeout)
# 检查电机是否存在
if motor_id not in self.motors:
self.logger.error(f"Motor {motor_id} not found in configured motors: {list(self.motors.keys())}")
return False
# 检查传感器是否可用
if not self.sensor:
self.logger.error("Sensor not initialized")
return False
motor = self.motors[motor_id]
# 停止轮询线程,避免与 separation_step 同时读取传感器造成串口冲突
self.logger.info("Stopping polling thread for separation_step...")
self._stop_event.set()
if self._poll_thread and self._poll_thread.is_alive():
self._poll_thread.join(timeout=2.0)
# 使能电机
self.logger.info(f"Enabling motor {motor_id}...")
motor.enable(True)
time.sleep(0.2)
self.logger.info(f"Starting separation step: motor_id={motor_id}, speed={speed} RPM, "
f"pulses={pulses}, max_cycles={max_cycles}, timeout={timeout}s")
# 记录上一次的液位状态
last_level = None
cycle_count = 0
start_time = time.time()
error_count = 0
try:
while True:
# 检查超时
if time.time() - start_time > timeout:
self.logger.warning(f"Separation step timeout after {timeout} seconds")
return False
# 检查循环次数限制
if max_cycles > 0 and cycle_count >= max_cycles:
self.logger.info(f"Separation step completed: reached max_cycles={max_cycles}")
return True
# 读取传感器数据
data = self.sensor.read_level()
if data is None:
error_count += 1
if error_count > 5:
self.logger.warning("Sensor read failed multiple times, retrying...")
error_count = 0
time.sleep(0.5)
continue
error_count = 0
current_level = data['level']
rssi = data['rssi']
# 检测状态变化 (包括首次检测)
if current_level != last_level:
cycle_count += 1
if current_level:
# 有液 -> 电机顺时针旋转
self.logger.info(f"[Cycle {cycle_count}] Liquid detected (RSSI={rssi}), "
f"rotating motor {motor_id} clockwise {pulses} pulses")
motor.run_position(pulses=pulses, speed_rpm=speed, direction=0, absolute=False)
# 等待电机完成 (预估时间)
estimated_time = 15.0 / max(1, speed)
time.sleep(estimated_time + 0.5)
else:
# 无液 -> 电机逆时针旋转
self.logger.info(f"[Cycle {cycle_count}] No liquid detected (RSSI={rssi}), "
f"rotating motor {motor_id} counter-clockwise {pulses} pulses")
motor.run_position(pulses=pulses, speed_rpm=speed, direction=1, absolute=False)
# 等待电机完成 (预估时间)
estimated_time = 15.0 / max(1, speed)
time.sleep(estimated_time + 0.5)
# 更新状态
last_level = current_level
# 轮询间隔
time.sleep(0.1)
finally:
# 恢复轮询线程
self.logger.info("Restarting polling thread...")
self._start_polling()
def execute_command_from_outer(self, command_dict: Dict[str, Any]) -> bool:
"""支持标准 JSON 指令调用"""
return super().execute_command_from_outer(command_dict)

View File

@@ -0,0 +1,379 @@
# -*- coding: utf-8 -*-
"""
XKC RS485 液位传感器 (Modbus RTU)
说明:
1. 遵循 Modbus-RTU 协议。
2. 数据寄存器: 0x0001 (液位状态, 1=有液, 0=无液), 0x0002 (RSSI 信号强度)。
3. 地址寄存器: 0x0004 (可读写, 范围 1-254)。
4. 波特率寄存器: 0x0005 (可写, 代码表见 change_baudrate 方法)。
"""
import struct
import threading
import time
import logging
import serial
from typing import Optional, Dict, Any, List
from unilabos.device_comms.universal_driver import UniversalDriver
class TransportManager:
"""
统一通信管理类。
仅支持 串口 (Serial/有线) 连接。
"""
def __init__(self, port: str, baudrate: int = 9600, timeout: float = 3.0, logger=None):
self.port = port
self.baudrate = baudrate
self.timeout = timeout
self.logger = logger
self.lock = threading.RLock() # 线程锁,确保多设备共用一个连接时不冲突
self.serial = None
self._connect_serial()
def _connect_serial(self):
try:
self.serial = serial.Serial(
port=self.port,
baudrate=self.baudrate,
timeout=self.timeout
)
except Exception as e:
raise ConnectionError(f"Serial open failed: {e}")
def close(self):
"""关闭连接"""
if self.serial and self.serial.is_open:
self.serial.close()
def clear_buffer(self):
"""清空缓冲区 (Thread-safe)"""
with self.lock:
if self.serial:
self.serial.reset_input_buffer()
def write(self, data: bytes):
"""发送原始字节"""
with self.lock:
if self.serial:
self.serial.write(data)
def read(self, size: int) -> bytes:
"""读取指定长度字节"""
if self.serial:
return self.serial.read(size)
return b''
class XKCSensorDriver(UniversalDriver):
"""XKC RS485 液位传感器 (Modbus RTU)"""
def __init__(self, port: str, baudrate: int = 9600, device_id: int = 6,
threshold: int = 300, timeout: float = 3.0, debug: bool = False):
super().__init__()
self.port = port
self.baudrate = baudrate
self.device_id = device_id
self.threshold = threshold
self.timeout = timeout
self.debug = debug
self.level = False
self.rssi = 0
self.status = {"level": self.level, "rssi": self.rssi}
try:
self.transport = TransportManager(port, baudrate, timeout, logger=self.logger)
self.logger.info(f"XKCSensorDriver connected to {port} (ID: {device_id})")
except Exception as e:
self.logger.error(f"Failed to connect XKCSensorDriver: {e}")
self.transport = None
# 启动背景轮询线程,确保 status 实时刷新
self._stop_event = threading.Event()
self._polling_thread = threading.Thread(
target=self._update_loop,
name=f"XKCPolling_{port}",
daemon=True
)
if self.transport:
self._polling_thread.start()
def _update_loop(self):
"""背景循环读取传感器数据"""
while not self._stop_event.is_set():
try:
self.read_level()
except Exception as e:
if self.debug:
self.logger.error(f"Polling error: {e}")
time.sleep(2.0) # 每2秒刷新一次数据
def _crc(self, data: bytes) -> bytes:
crc = 0xFFFF
for byte in data:
crc ^= byte
for _ in range(8):
if crc & 0x0001: crc = (crc >> 1) ^ 0xA001
else: crc >>= 1
return struct.pack('<H', crc)
def read_level(self) -> Optional[Dict[str, Any]]:
"""
读取液位。
返回: {'level': bool, 'rssi': int}
"""
if not self.transport:
return None
with self.transport.lock:
self.transport.clear_buffer()
# Modbus Read Registers: 01 03 00 01 00 02 CRC
payload = struct.pack('>HH', 0x0001, 0x0002)
msg = struct.pack('BB', self.device_id, 0x03) + payload
msg += self._crc(msg)
if self.debug:
self.logger.info(f"TX (ID {self.device_id}): {msg.hex().upper()}")
self.transport.write(msg)
# Read header
h = self.transport.read(3) # Addr, Func, Len
if self.debug:
self.logger.info(f"RX Header: {h.hex().upper()}")
if len(h) < 3: return None
length = h[2]
# Read body + CRC
body = self.transport.read(length + 2)
if self.debug:
self.logger.info(f"RX Body+CRC: {body.hex().upper()}")
if len(body) < length + 2:
# Firmware bug fix specific to some modules
if len(body) == 4 and length == 4:
pass
else:
return None
data = body[:-2]
# 根据手册说明:
# 寄存器 0x0001 (data[0:2]): 液位状态 (00 01 为有液, 00 00 为无液)
# 寄存器 0x0002 (data[2:4]): 信号强度 RSSI
hw_level = False
rssi = 0
if len(data) >= 4:
hw_level = ((data[0] << 8) | data[1]) == 1
rssi = (data[2] << 8) | data[3]
elif len(data) == 2:
# 兼容模式: 某些老固件可能只返回 1 个寄存器
rssi = (data[0] << 8) | data[1]
hw_level = rssi > self.threshold
else:
return None
# 最终判定: 优先使用硬件层级的 level 判定,但 RSSI 阈值逻辑作为补充/校验
# 注意: 如果用户显式设置了 THRESHOLD我们可以在逻辑中做权衡
self.level = hw_level or (rssi > self.threshold)
self.rssi = rssi
result = {
'level': self.level,
'rssi': self.rssi
}
self.status = result
return result
def wait_level(self, target_state: bool, timeout: float = 60.0) -> bool:
"""
等待液位达到目标状态 (阻塞式)
"""
self.logger.info(f"Waiting for level: {target_state}")
start_time = time.time()
while (time.time() - start_time) < timeout:
res = self.read_level()
if res and res.get('level') == target_state:
return True
time.sleep(0.5)
self.logger.warning(f"Wait level timeout ({timeout}s)")
return False
def wait_for_liquid(self, target_state: bool, timeout: float = 120.0) -> bool:
"""
实时检测电导率(RSSI)并等待用户指定的“有液”或“无液”状态。
一旦检测到符合目标状态,立即返回。
Args:
target_state: True 为“有液”, False 为“无液”
timeout: 最大等待时间(秒)
"""
state_str = "有液" if target_state else "无液"
self.logger.info(f"开始实时检测电导率,等待状态: {state_str} (超时: {timeout}s)")
start_time = time.time()
while (time.time() - start_time) < timeout:
res = self.read_level() # 内部已更新 self.level 和 self.rssi
if res:
current_level = res.get('level')
current_rssi = res.get('rssi')
if current_level == target_state:
self.logger.info(f"✅ 检测到目标状态: {state_str} (当前电导率/RSSI: {current_rssi})")
return True
if self.debug:
self.logger.debug(f"当前状态: {'有液' if current_level else '无液'}, RSSI: {current_rssi}")
time.sleep(0.2) # 高频采样
self.logger.warning(f"❌ 等待 {state_str} 状态超时 ({timeout}s)")
return False
def set_threshold(self, threshold: int):
"""设置液位判定阈值"""
self.threshold = int(threshold)
self.logger.info(f"Threshold updated to: {self.threshold}")
def change_device_id(self, new_id: int) -> bool:
"""
修改设备的 Modbus 从站地址。
寄存器: 0x0004, 功能码: 0x06
"""
if not (1 <= new_id <= 254):
self.logger.error(f"Invalid device ID: {new_id}. Must be 1-254.")
return False
self.logger.info(f"Changing device ID from {self.device_id} to {new_id}")
success = self._write_single_register(0x0004, new_id)
if success:
self.device_id = new_id # 更新内存中的地址
self.logger.info(f"Device ID update command sent successfully (target {new_id}).")
return success
def change_baudrate(self, baud_code: int) -> bool:
"""
更改通讯波特率 (寄存器: 0x0005)。
设置成功后传感器 LED 会闪烁,通常无数据返回。
波特率代码对照表 (16进制):
05: 2400
06: 4800
07: 9600 (默认)
08: 14400
09: 19200
0A: 28800
0C: 57600
0D: 115200
0E: 128000
0F: 256000
"""
self.logger.info(f"Sending baudrate change command (Code: {baud_code:02X})")
# 写入寄存器 0x0005
self._write_single_register(0x0005, baud_code)
self.logger.info("Baudrate change command executed. Device LED should flash. Please update connection settings.")
return True
def factory_reset(self) -> bool:
"""
恢复出厂设置 (通过广播地址 FF)。
设置地址为 01逻辑为向 0x0004 写入 0x0002
"""
self.logger.info("Sending factory reset command via broadcast address FF...")
# 广播指令通常无回显
self._write_single_register(0x0004, 0x0002, slave_id=0xFF)
self.logger.info("Factory reset command sent. Device address should be 01 now.")
return True
def _write_single_register(self, reg_addr: int, value: int, slave_id: Optional[int] = None) -> bool:
"""内部辅助函数: Modbus 功能码 06 写单个寄存器"""
if not self.transport: return False
target_id = slave_id if slave_id is not None else self.device_id
msg = struct.pack('BBHH', target_id, 0x06, reg_addr, value)
msg += self._crc(msg)
with self.transport.lock:
self.transport.clear_buffer()
if self.debug:
self.logger.info(f"TX Write (Reg {reg_addr:#06x}): {msg.hex().upper()}")
self.transport.write(msg)
# 广播地址、波特率修改或厂家特定指令可能无回显
if target_id == 0xFF or reg_addr == 0x0005:
time.sleep(0.5)
return True
# 等待返回 (正常应返回相同报文)
resp = self.transport.read(len(msg))
if self.debug:
self.logger.info(f"RX Write Response: {resp.hex().upper()}")
return resp == msg
def close(self):
if self.transport:
self.transport.close()
if __name__ == "__main__":
# 快速实例化测试
import logging
# 减少冗余日志,仅显示重要信息
logging.basicConfig(level=logging.INFO, format='%(levelname)s: %(message)s')
# 硬件配置 (根据实际情况修改)
TEST_PORT = "/dev/tty.usbserial-3110"
SLAVE_ID = 1
THRESHOLD = 300
print("\n" + "="*50)
print(f" XKC RS485 传感器独立测试程序")
print(f" 端口: {TEST_PORT} | 地址: {SLAVE_ID} | 阈值: {THRESHOLD}")
print("="*50)
sensor = XKCSensorDriver(port=TEST_PORT, device_id=SLAVE_ID, threshold=THRESHOLD, debug=False)
try:
if sensor.transport:
print(f"\n开始实时连续采样测试 (持续 15 秒)...")
print(f"按 Ctrl+C 可提前停止\n")
start_time = time.time()
duration = 15
count = 0
while time.time() - start_time < duration:
count += 1
res = sensor.read_level()
if res:
rssi = res['rssi']
level = res['level']
status_str = "【有液】" if level else "【无液】"
# 使用 \r 实现单行刷新显示 (或者不刷,直接打印历史)
# 为了方便查看变化,我们直接打印
elapsed = time.time() - start_time
print(f" [{elapsed:4.1f}s] 采样 {count:<3}: 电导率/RSSI = {rssi:<5} | 判定结果: {status_str}")
else:
print(f" [{time.time()-start_time:4.1f}s] 采样 {count:<3}: 通信失败 (无响应)")
time.sleep(0.5) # 每秒采样 2 次
print(f"\n--- 15 秒采样测试完成 (总计 {count} 次) ---")
# [3] 测试动态修改阈值
print(f"\n[3] 动态修改阈值演示...")
new_threshold = 400
sensor.set_threshold(new_threshold)
res = sensor.read_level()
if res:
print(f" 采样 (当前阈值={new_threshold}): 电导率/RSSI = {res['rssi']:<5} | 判定结果: {'【有液】' if res['level'] else '【无液】'}")
sensor.set_threshold(THRESHOLD) # 还原
except KeyboardInterrupt:
print("\n[!] 用户中断测试")
except Exception as e:
print(f"\n[!] 测试运行出错: {e}")
finally:
sensor.close()
print("\n--- 测试程序已退出 ---\n")

View File

@@ -258,7 +258,7 @@ class BioyondResourceSynchronizer(ResourceSynchronizer):
logger.info(f"[同步→Bioyond] 物料不存在于 Bioyond将创建新物料并入库")
# 第1步从配置中获取仓库配置
warehouse_mapping = self.bioyond_config.get("warehouse_mapping", {})
warehouse_mapping = self.workstation.bioyond_config.get("warehouse_mapping", {})
# 确定目标仓库名称
parent_name = None

View File

@@ -336,6 +336,47 @@ separator.chinwe:
title: pump_valve参数
type: object
type: UniLabJsonCommand
separation_step:
goal:
max_cycles: 0
motor_id: 5
pulses: 700
speed: 60
timeout: 300
handles: {}
schema:
description: 分液步骤 - 液位传感器与电机联动 (有液→顺时针, 无液→逆时针)
properties:
goal:
properties:
max_cycles:
default: 0
description: 最大循环次数 (0=无限制)
type: integer
motor_id:
default: '5'
description: 选择电机
enum:
- '4'
- '5'
title: '注: 4=搅拌, 5=旋钮'
type: string
pulses:
default: 700
description: 每次旋转脉冲数 (约1/4圈)
type: integer
speed:
default: 60
description: 电机转速 (RPM)
type: integer
timeout:
default: 300
description: 超时时间 (秒)
type: integer
required:
- motor_id
type: object
type: UniLabJsonCommand
wait_sensor_level:
feedback: {}
goal:

View File

@@ -6973,7 +6973,7 @@ liquid_handler.laiyu:
properties:
channel_num:
default: 1
type: string
type: integer
deck:
type: object
host:
@@ -6984,10 +6984,25 @@ liquid_handler.laiyu:
type: integer
simulator:
default: true
type: string
type: boolean
timeout:
default: 10.0
type: number
serial_port:
default: /dev/ttyUSB0
description: 硬件串口端口(非 simulator 模式下使用)
type: string
baudrate:
default: 115200
type: integer
pipette_address:
default: 4
description: SOPA 移液器 RS485 地址
type: integer
total_height:
default: 310
description: 龙门架总高度 (mm),用于坐标转换
type: number
required:
- deck
type: object

View File

@@ -0,0 +1,286 @@
motor.zdt_x42:
category:
- motor
class:
action_value_mappings:
auto-enable:
feedback: {}
goal: {}
goal_default:
'on': true
handles: {}
placeholder_keys: {}
result: {}
schema:
description: 使能或禁用电机。使能后电机进入锁轴状态,可接收运动指令;禁用后电机进入松轴状态。
properties:
feedback: {}
goal:
properties:
'on':
default: true
type: boolean
required: []
type: object
result: {}
required:
- goal
title: enable参数
type: object
type: UniLabJsonCommand
auto-get_position:
feedback: {}
goal: {}
goal_default: {}
handles: {}
placeholder_keys: {}
result: {}
schema:
description: 获取当前电机脉冲位置。
properties:
feedback: {}
goal:
properties: {}
required: []
type: object
result:
properties:
position:
type: integer
type: object
required:
- goal
title: get_position参数
type: object
type: UniLabJsonCommand
auto-move_position:
feedback: {}
goal: {}
goal_default:
absolute: false
acceleration: 10
direction: CW
pulses: 1000
speed_rpm: 60
handles: {}
placeholder_keys: {}
result: {}
schema:
description: 位置模式运行。控制电机移动到指定脉冲位置或相对于当前位置移动指定脉冲数。
properties:
feedback: {}
goal:
properties:
absolute:
default: false
type: boolean
acceleration:
default: 10
maximum: 255
minimum: 0
type: integer
direction:
default: CW
enum:
- CW
- CCW
type: string
pulses:
default: 1000
type: integer
speed_rpm:
default: 60
minimum: 0
type: integer
required:
- pulses
- speed_rpm
type: object
result: {}
required:
- goal
title: move_position参数
type: object
type: UniLabJsonCommand
auto-move_speed:
feedback: {}
goal: {}
goal_default:
acceleration: 10
direction: CW
speed_rpm: 60
handles: {}
placeholder_keys: {}
result: {}
schema:
description: 速度模式运行。控制电机以指定转速和方向持续转动。
properties:
feedback: {}
goal:
properties:
acceleration:
default: 10
maximum: 255
minimum: 0
type: integer
direction:
default: CW
enum:
- CW
- CCW
type: string
speed_rpm:
default: 60
minimum: 0
type: integer
required:
- speed_rpm
type: object
result: {}
required:
- goal
title: move_speed参数
type: object
type: UniLabJsonCommand
auto-rotate_quarter:
feedback: {}
goal: {}
goal_default:
direction: CW
speed_rpm: 60
handles: {}
placeholder_keys: {}
result: {}
schema:
description: 电机旋转 1/4 圈 (阻塞式)。
properties:
feedback: {}
goal:
properties:
direction:
default: CW
enum:
- CW
- CCW
type: string
speed_rpm:
default: 60
minimum: 1
type: integer
required: []
type: object
result: {}
required:
- goal
title: rotate_quarter参数
type: object
type: UniLabJsonCommand
auto-set_zero:
feedback: {}
goal: {}
goal_default: {}
handles: {}
placeholder_keys: {}
result: {}
schema:
description: 将当前电机位置设为零点。
properties:
feedback: {}
goal:
properties: {}
required: []
type: object
result: {}
required:
- goal
title: set_zero参数
type: object
type: UniLabJsonCommand
auto-stop:
feedback: {}
goal: {}
goal_default: {}
handles: {}
placeholder_keys: {}
result: {}
schema:
description: 立即停止电机运动。
properties:
feedback: {}
goal:
properties: {}
required: []
type: object
result: {}
required:
- goal
title: stop参数
type: object
type: UniLabJsonCommand
auto-wait_time:
feedback: {}
goal: {}
goal_default:
duration_s: 1.0
handles: {}
placeholder_keys: {}
result: {}
schema:
description: 等待指定时间 (秒)。
properties:
feedback: {}
goal:
properties:
duration_s:
default: 1.0
minimum: 0
type: number
required:
- duration_s
type: object
result: {}
required:
- goal
title: wait_time参数
type: object
type: UniLabJsonCommand
module: unilabos.devices.motor.ZDT_X42:ZDTX42Driver
status_types:
position: int
status: str
type: python
config_info: []
description: ZDT X42 闭环步进电机驱动。支持速度运行、精确位置控制、位置查询和清零功能。适用于各种需要精确运动控制的实验室自动化场景。
handles: []
icon: ''
init_param_schema:
config:
properties:
baudrate:
default: 115200
type: integer
debug:
default: false
type: boolean
device_id:
default: 1
type: integer
port:
type: string
timeout:
default: 0.5
type: number
required:
- port
type: object
data:
properties:
position:
type: integer
status:
type: string
required:
- status
- position
type: object
version: 1.0.0

View File

@@ -0,0 +1,148 @@
sensor.xkc_rs485:
category:
- sensor
- separator
class:
action_value_mappings:
auto-change_baudrate:
goal:
baud_code: 7
handles: {}
schema:
description: '更改通讯波特率 (设置成功后无返回,且需手动切换波特率重连)。代码表 (16进制): 05=2400, 06=4800,
07=9600, 08=14400, 09=19200, 0A=28800, 0C=57600, 0D=115200, 0E=128000,
0F=256000'
properties:
goal:
properties:
baud_code:
description: '波特率代码 (例如: 7 为 9600, 13 即 0x0D 为 115200)'
type: integer
required:
- baud_code
type: object
type: UniLabJsonCommand
auto-change_device_id:
goal:
new_id: 1
handles: {}
schema:
description: 修改传感器的 Modbus 从站地址
properties:
goal:
properties:
new_id:
description: 新的从站地址 (1-254)
maximum: 254
minimum: 1
type: integer
required:
- new_id
type: object
type: UniLabJsonCommand
auto-factory_reset:
goal: {}
handles: {}
schema:
description: 恢复出厂设置 (地址重置为 01)
properties:
goal:
type: object
type: UniLabJsonCommand
auto-read_level:
goal: {}
handles: {}
schema:
description: 直接读取当前液位及信号强度
properties:
goal:
type: object
type: object
type: UniLabJsonCommand
auto-set_threshold:
goal:
threshold: 300
handles: {}
schema:
description: 设置液位判定阈值
properties:
goal:
properties:
threshold:
type: integer
required:
- threshold
type: object
type: UniLabJsonCommand
auto-wait_for_liquid:
goal:
target_state: true
timeout: 120
handles: {}
schema:
description: 实时检测电导率(RSSI)并等待用户指定的状态
properties:
goal:
properties:
target_state:
default: true
description: 目标状态 (True=有液, False=无液)
type: boolean
timeout:
default: 120
description: 超时时间 (秒)
required:
- target_state
type: object
type: UniLabJsonCommand
auto-wait_level:
goal:
level: true
timeout: 10
handles: {}
schema:
description: 等待液位达到目标状态
properties:
goal:
properties:
level:
type: boolean
timeout:
type: number
required:
- level
type: object
type: UniLabJsonCommand
module: unilabos.devices.separator.xkc_sensor:XKCSensorDriver
status_types:
level: bool
rssi: int
type: python
config_info: []
description: XKC RS485 非接触式液位传感器 (Modbus RTU)
handles: []
icon: ''
init_param_schema:
config:
properties:
baudrate:
default: 9600
type: integer
debug:
default: false
type: boolean
device_id:
default: 1
type: integer
port:
type: string
threshold:
default: 300
type: integer
timeout:
default: 3.0
type: number
required:
- port
type: object
version: 1.0.0

View File

@@ -1,4 +1,4 @@
from pylabrobot.resources import create_homogeneous_resources, Coordinate, ResourceHolder, create_ordered_items_2d
from pylabrobot.resources import create_homogeneous_resources, Coordinate, ResourceHolder, create_ordered_items_2d, Container
from unilabos.resources.itemized_carrier import BottleCarrier
from unilabos.resources.bioyond.bottles import (
@@ -9,6 +9,28 @@ from unilabos.resources.bioyond.bottles import (
BIOYOND_PolymerStation_Reagent_Bottle,
BIOYOND_PolymerStation_Flask,
)
def BIOYOND_PolymerStation_Tip(name: str, size_x: float = 8.0, size_y: float = 8.0, size_z: float = 50.0) -> Container:
"""创建单个枪头资源
Args:
name: 枪头名称
size_x: 枪头宽度 (mm)
size_y: 枪头长度 (mm)
size_z: 枪头高度 (mm)
Returns:
Container: 枪头容器
"""
return Container(
name=name,
size_x=size_x,
size_y=size_y,
size_z=size_z,
category="tip",
model="BIOYOND_PolymerStation_Tip",
)
# 命名约定:试剂瓶-Bottle烧杯-Beaker烧瓶-Flask,小瓶-Vial
@@ -322,3 +344,88 @@ def BIOYOND_Electrolyte_1BottleCarrier(name: str) -> BottleCarrier:
carrier.num_items_z = 1
carrier[0] = BIOYOND_PolymerStation_Solution_Beaker(f"{name}_beaker_1")
return carrier
def BIOYOND_PolymerStation_TipBox(
name: str,
size_x: float = 127.76, # 枪头盒宽度
size_y: float = 85.48, # 枪头盒长度
size_z: float = 100.0, # 枪头盒高度
barcode: str = None,
) -> BottleCarrier:
"""创建4×6枪头盒 (24个枪头) - 使用 BottleCarrier 结构
Args:
name: 枪头盒名称
size_x: 枪头盒宽度 (mm)
size_y: 枪头盒长度 (mm)
size_z: 枪头盒高度 (mm)
barcode: 条形码
Returns:
BottleCarrier: 包含24个枪头孔位的枪头盒载架
布局说明:
- 4行×6列 (A-D, 1-6)
- 枪头孔位间距: 18mm (x方向) × 18mm (y方向)
- 起始位置居中对齐
- 索引顺序: 列优先 (0=A1, 1=B1, 2=C1, 3=D1, 4=A2, ...)
"""
# 枪头孔位参数
num_cols = 6 # 1-6 (x方向)
num_rows = 4 # A-D (y方向)
tip_diameter = 8.0 # 枪头孔位直径
tip_spacing_x = 18.0 # 列间距 (增加到18mm更宽松)
tip_spacing_y = 18.0 # 行间距 (增加到18mm更宽松)
# 计算起始位置 (居中对齐)
total_width = (num_cols - 1) * tip_spacing_x + tip_diameter
total_height = (num_rows - 1) * tip_spacing_y + tip_diameter
start_x = (size_x - total_width) / 2
start_y = (size_y - total_height) / 2
# 使用 create_ordered_items_2d 创建孔位
# create_ordered_items_2d 返回的 key 是数字索引: 0, 1, 2, ...
# 顺序是列优先: 先y后x (即 0=A1, 1=B1, 2=C1, 3=D1, 4=A2, 5=B2, ...)
sites = create_ordered_items_2d(
klass=ResourceHolder,
num_items_x=num_cols,
num_items_y=num_rows,
dx=start_x,
dy=start_y,
dz=5.0,
item_dx=tip_spacing_x,
item_dy=tip_spacing_y,
size_x=tip_diameter,
size_y=tip_diameter,
size_z=50.0, # 枪头深度
)
# 更新 sites 中每个 ResourceHolder 的名称
for k, v in sites.items():
v.name = f"{name}_{v.name}"
# 创建枪头盒载架
# 注意:不设置 category使用默认的 "bottle_carrier",这样前端会显示为完整的矩形载架
tip_box = BottleCarrier(
name=name,
size_x=size_x,
size_y=size_y,
size_z=size_z,
sites=sites, # 直接使用数字索引的 sites
model="BIOYOND_PolymerStation_TipBox",
)
# 设置自定义属性
tip_box.barcode = barcode
tip_box.tip_count = 24 # 4行×6列
tip_box.num_items_x = num_cols
tip_box.num_items_y = num_rows
tip_box.num_items_z = 1
# ⭐ 枪头盒不需要放入子资源
# 与其他 carrier 不同,枪头盒在 Bioyond 中是一个整体
# 不需要追踪每个枪头的状态,保持为空的 ResourceHolder 即可
# 这样前端会显示24个空槽位可以用于放置枪头
return tip_box

View File

@@ -116,7 +116,9 @@ def BIOYOND_PolymerStation_TipBox(
size_z: float = 100.0, # 枪头盒高度
barcode: str = None,
):
"""创建4×6枪头盒 (24个枪头)
"""创建4×6枪头盒 (24个枪头) - 使用 BottleCarrier 结构
注意:此函数已弃用,请使用 bottle_carriers.py 中的版本
Args:
name: 枪头盒名称
@@ -126,55 +128,11 @@ def BIOYOND_PolymerStation_TipBox(
barcode: 条形码
Returns:
TipBoxCarrier: 包含24个枪头孔位的枪头盒
BottleCarrier: 包含24个枪头孔位的枪头盒载架
"""
from pylabrobot.resources import Container, Coordinate
# 创建枪头盒容器
tip_box = Container(
name=name,
size_x=size_x,
size_y=size_y,
size_z=size_z,
category="tip_rack",
model="BIOYOND_PolymerStation_TipBox_4x6",
)
# 设置自定义属性
tip_box.barcode = barcode
tip_box.tip_count = 24 # 4行×6列
tip_box.num_items_x = 6 # 6列
tip_box.num_items_y = 4 # 4行
# 创建24个枪头孔位 (4行×6列)
# 假设孔位间距为 9mm
tip_spacing_x = 9.0 # 列间距
tip_spacing_y = 9.0 # 行间距
start_x = 14.38 # 第一个孔位的x偏移
start_y = 11.24 # 第一个孔位的y偏移
for row in range(4): # A, B, C, D
for col in range(6): # 1-6
spot_name = f"{chr(65 + row)}{col + 1}" # A1, A2, ..., D6
x = start_x + col * tip_spacing_x
y = start_y + row * tip_spacing_y
# 创建枪头孔位容器
tip_spot = Container(
name=spot_name,
size_x=8.0, # 单个枪头孔位大小
size_y=8.0,
size_z=size_z - 10.0, # 略低于盒子高度
category="tip_spot",
)
# 添加到枪头盒
tip_box.assign_child_resource(
tip_spot,
location=Coordinate(x=x, y=y, z=0)
)
return tip_box
# 重定向到 bottle_carriers.py 中的实现
from unilabos.resources.bioyond.bottle_carriers import BIOYOND_PolymerStation_TipBox as TipBox_Carrier
return TipBox_Carrier(name=name, size_x=size_x, size_y=size_y, size_z=size_z, barcode=barcode)
def BIOYOND_PolymerStation_Flask(

View File

@@ -797,9 +797,12 @@ def resource_bioyond_to_plr(bioyond_materials: list[dict], type_mapping: Dict[st
bottle = plr_material[number] = initialize_resource(
{"name": f'{detail["name"]}_{number}', "class": reverse_type_mapping[typeName][0]}, resource_type=ResourcePLR
)
bottle.tracker.liquids = [
(detail["name"], float(detail.get("quantity", 0)) if detail.get("quantity") else 0)
]
# 只有具有 tracker 属性的容器才设置液体信息(如 Bottle, Well
# ResourceHolder 等不支持液体追踪的容器跳过
if hasattr(bottle, "tracker"):
bottle.tracker.liquids = [
(detail["name"], float(detail.get("quantity", 0)) if detail.get("quantity") else 0)
]
bottle.code = detail.get("code", "")
logger.debug(f" └─ [子物料] {detail['name']}{plr_material.name}[{number}] (类型:{typeName})")
else:
@@ -808,9 +811,11 @@ def resource_bioyond_to_plr(bioyond_materials: list[dict], type_mapping: Dict[st
# 只对有 capacity 属性的容器(液体容器)处理液体追踪
if hasattr(plr_material, 'capacity'):
bottle = plr_material[0] if plr_material.capacity > 0 else plr_material
bottle.tracker.liquids = [
(material["name"], float(material.get("quantity", 0)) if material.get("quantity") else 0)
]
# 确保 bottletracker 属性才设置液体信息
if hasattr(bottle, "tracker"):
bottle.tracker.liquids = [
(material["name"], float(material.get("quantity", 0)) if material.get("quantity") else 0)
]
plr_materials.append(plr_material)
@@ -839,24 +844,29 @@ def resource_bioyond_to_plr(bioyond_materials: list[dict], type_mapping: Dict[st
wh_name = loc.get("whName")
logger.debug(f"[物料位置] {unique_name} 尝试放置到 warehouse: {wh_name} (Bioyond坐标: x={loc.get('x')}, y={loc.get('y')}, z={loc.get('z')})")
# Bioyond坐标映射 (重要!): x→行(1=A,2=B...), y→列(1=01,2=02...), z→层(通常=1)
# 必须在warehouse映射之前先获取坐标以便后续调整
x = loc.get("x", 1) # 行号 (1-based: 1=A, 2=B, 3=C, 4=D)
y = loc.get("y", 1) # 列号 (1-based: 1=01, 2=02, 3=03...)
z = loc.get("z", 1) # 层号 (1-based, 通常为1)
# 特殊处理: Bioyond的"堆栈1"需要映射到"堆栈1左"或"堆栈1右"
# 根据列号(x)判断: 1-4映射到左侧, 5-8映射到右侧
# 根据列号(y)判断: 1-4映射到左侧, 5-8映射到右侧
if wh_name == "堆栈1":
x_val = loc.get("x", 1)
if 1 <= x_val <= 4:
if 1 <= y <= 4:
wh_name = "堆栈1左"
elif 5 <= x_val <= 8:
elif 5 <= y <= 8:
wh_name = "堆栈1右"
y = y - 4 # 调整列号: 5-8映射到1-4
else:
logger.warning(f"物料 {material['name']} 的列号 x={x_val} 超出范围无法映射到堆栈1左或堆栈1右")
logger.warning(f"物料 {material['name']} 的列号 y={y} 超出范围无法映射到堆栈1左或堆栈1右")
continue
# 特殊处理: Bioyond的"站内Tip盒堆栈"也需要进行拆分映射
if wh_name == "站内Tip盒堆栈":
y_val = loc.get("y", 1)
if y_val == 1:
if y == 1:
wh_name = "站内Tip盒堆栈(右)"
elif y_val in [2, 3]:
elif y in [2, 3]:
wh_name = "站内Tip盒堆栈(左)"
y = y - 1 # 调整列号,因为左侧仓库对应的 Bioyond y=2 实际上是它的第1列
@@ -864,15 +874,6 @@ def resource_bioyond_to_plr(bioyond_materials: list[dict], type_mapping: Dict[st
warehouse = deck.warehouses[wh_name]
logger.debug(f"[Warehouse匹配] 找到warehouse: {wh_name} (容量: {warehouse.capacity}, 行×列: {warehouse.num_items_x}×{warehouse.num_items_y})")
# Bioyond坐标映射 (重要!): x→行(1=A,2=B...), y→列(1=01,2=02...), z→层(通常=1)
x = loc.get("x", 1) # 行号 (1-based: 1=A, 2=B, 3=C, 4=D)
y = loc.get("y", 1) # 列号 (1-based: 1=01, 2=02, 3=03...)
z = loc.get("z", 1) # 层号 (1-based, 通常为1)
# 如果是右侧堆栈,需要调整列号 (5→1, 6→2, 7→3, 8→4)
if wh_name == "堆栈1右":
y = y - 4 # 将5-8映射到1-4
# 特殊处理竖向warehouse站内试剂存放堆栈、测量小瓶仓库
# 这些warehouse使用 vertical-col-major 布局
if wh_name in ["站内试剂存放堆栈", "测量小瓶仓库(测密度)"]:

View File

@@ -18,3 +18,9 @@ def register():
from unilabos.devices.liquid_handling.rviz_backend import UniLiquidHandlerRvizBackend
from unilabos.devices.liquid_handling.laiyu.backend.laiyu_v_backend import UniLiquidHandlerLaiyuBackend
# noinspection PyUnresolvedReferences
from unilabos.resources.bioyond.decks import (
BIOYOND_PolymerReactionStation_Deck,
BIOYOND_PolymerPreparationStation_Deck,
BIOYOND_YB_Deck,
)

View File

@@ -423,6 +423,7 @@ class ResourceTreeSet(object):
"deck": "deck",
"tip_rack": "tip_rack",
"tip_spot": "tip_spot",
"tip": "tip", # 添加 tip 类型支持
"tube": "tube",
"bottle_carrier": "bottle_carrier",
"material_hole": "material_hole",

View File

@@ -0,0 +1,29 @@
{
"nodes": [
{
"id": "Liquid_Sensor_1",
"name": "XKC Sensor",
"children": [],
"parent": null,
"type": "device",
"class": "sensor.xkc_rs485",
"position": {
"x": 0,
"y": 0,
"z": 0
},
"config": {
"port": "/dev/tty.usbserial-3110",
"baudrate": 9600,
"device_id": 1,
"threshold": 300,
"timeout": 3.0
},
"data": {
"level": false,
"rssi": 0
}
}
],
"links": []
}

View File

@@ -0,0 +1,28 @@
{
"nodes": [
{
"id": "ZDT_Motor",
"name": "ZDT Motor",
"children": [],
"parent": null,
"type": "device",
"class": "motor.zdt_x42",
"position": {
"x": 0,
"y": 0,
"z": 0
},
"config": {
"port": "/dev/tty.usbserial-3110",
"baudrate": 115200,
"device_id": 1,
"debug": true
},
"data": {
"position": 0,
"status": "idle"
}
}
],
"links": []
}